Packages

case class CONSEQUENCES(ensembl_transcript_id: String = "ENST00000335137", vep_impact: String = "LOW", ensembl_feature_id: String = "ENST00000335137", feature_type: String = "Transcript", strand: Int = 1, exon: EXON = EXON(), intron: INTRON = INTRON(), hgvsc: String = "ENST00000335137.4:c.807T>C", hgvsp: String = "ENSP00000334393.3:p.Ser269=", cds_position: Int = 807, cdna_position: Int = 843, protein_position: Int = 269, amino_acids: AMINO_ACIDS = AMINO_ACIDS(), codons: CODONS = CODONS(), refseq_mrna_id: Seq[String] = ..., refseq_protein_id: Option[String] = Some("NP_001005277"), aa_change: String = "p.Ser269=", coding_dna_change: String = "c.807T>C", impact_score: Int = 2, consequence: Seq[String] = Seq("synonymous"), predictions: PREDICTIONS = PREDICTIONS(), conservations: CONSERVATIONS = CONSERVATIONS(), uniprot_id: Option[String] = Some("Q6IEY1"), mane_select: Boolean = true, mane_plus: Boolean = true, canonical: Boolean = true, picked: Boolean = true) extends Product with Serializable

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  1. CONSEQUENCES
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Instance Constructors

  1. new CONSEQUENCES(ensembl_transcript_id: String = "ENST00000335137", vep_impact: String = "LOW", ensembl_feature_id: String = "ENST00000335137", feature_type: String = "Transcript", strand: Int = 1, exon: EXON = EXON(), intron: INTRON = INTRON(), hgvsc: String = "ENST00000335137.4:c.807T>C", hgvsp: String = "ENSP00000334393.3:p.Ser269=", cds_position: Int = 807, cdna_position: Int = 843, protein_position: Int = 269, amino_acids: AMINO_ACIDS = AMINO_ACIDS(), codons: CODONS = CODONS(), refseq_mrna_id: Seq[String] = ..., refseq_protein_id: Option[String] = Some("NP_001005277"), aa_change: String = "p.Ser269=", coding_dna_change: String = "c.807T>C", impact_score: Int = 2, consequence: Seq[String] = Seq("synonymous"), predictions: PREDICTIONS = PREDICTIONS(), conservations: CONSERVATIONS = CONSERVATIONS(), uniprot_id: Option[String] = Some("Q6IEY1"), mane_select: Boolean = true, mane_plus: Boolean = true, canonical: Boolean = true, picked: Boolean = true)

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  4. val aa_change: String
  5. val amino_acids: AMINO_ACIDS
  6. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  7. val canonical: Boolean
  8. val cdna_position: Int
  9. val cds_position: Int
  10. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native() @HotSpotIntrinsicCandidate()
  11. val coding_dna_change: String
  12. val codons: CODONS
  13. val consequence: Seq[String]
  14. val conservations: CONSERVATIONS
  15. val ensembl_feature_id: String
  16. val ensembl_transcript_id: String
  17. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  18. val exon: EXON
  19. val feature_type: String
  20. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  21. val hgvsc: String
  22. val hgvsp: String
  23. val impact_score: Int
  24. val intron: INTRON
  25. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  26. val mane_plus: Boolean
  27. val mane_select: Boolean
  28. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  29. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  30. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  31. val picked: Boolean
  32. val predictions: PREDICTIONS
  33. val protein_position: Int
  34. val refseq_mrna_id: Seq[String]
  35. val refseq_protein_id: Option[String]
  36. val strand: Int
  37. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  38. val uniprot_id: Option[String]
  39. val vep_impact: String
  40. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  41. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  42. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Deprecated Value Members

  1. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] ) @Deprecated
    Deprecated

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