Type Members

1.  case class COSMIC(tumour_types_germline: Seq[String] = ...) extends Product with Serializable
2.  case class DDD(disease_name: String = "OCULOAURICULAR SYNDROME") extends Product with Serializable
3.  case class GENE_SUGGEST(input: Seq[String] = Seq("OR4F5"), weight: Int = 5) extends Product with Serializable
4.  case class GNOMAD(pli: Float = 1.0f, loeuf: Float = 0.054f) extends Product with Serializable
5.  case class HPO(hpo_term_id: String = "HP:0001347", hpo_term_name: String = "Hyperreflexia", hpo_term_label: String = "Hyperreflexia (HP:0001347)") extends Product with Serializable
6.  case class OMIM(name: String = ..., omim_id: String = "618285", inheritance: Seq[String] = Seq("Autosomal dominant"), inheritance_code: Seq[String] = Seq("AD")) extends Product with Serializable
7.  case class ORPHANET(disorder_id: Long = 17827, panel: String = ..., inheritance: Seq[String] = Seq("Autosomal recessive")) extends Product with Serializable
8.  case class PreparedGeneCentric(symbol: String = "OR4F5", entrez_gene_id: Int = 777, omim_gene_id: String = "601013", hgnc: String = "HGNC:1392", ensembl_gene_id: String = "ENSG00000198216", location: String = "1q25.3", name: String = ..., alias: Seq[String] = ..., biotype: String = "protein_coding", orphanet: Seq[ORPHANET] = Seq(ORPHANET()), hpo: Seq[HPO] = Seq(HPO()), omim: Seq[OMIM] = Seq(OMIM()), chromosome: String = "1", ddd: Seq[DDD] = Seq(DDD()), cosmic: Seq[COSMIC] = Seq(COSMIC()), gnomad: GNOMAD = GNOMAD(), hash: String = ..., search_text: Seq[String] = ...) extends Product with Serializable
9.  case class PreparedGeneSuggestions(type: String = "gene", symbol: String = "OR4F5", suggestion_id: String = ..., suggest: Seq[GENE_SUGGEST] = ..., ensembl_gene_id: String = "ENSG00000198216") extends Product with Serializable
10.  case class PreparedVariantCentric(chromosome: String = "1", start: Long = 69897, reference: String = "T", alternate: String = "C", end: Long = 69898, locus: String = "1-69897-T-C", hash: String = ..., hgvsg: String = "chr1:g.69897T>C", variant_class: String = "SNV", assembly_version: String = "GRCh38", frequency: FREQUENCY = FREQUENCY(), external_frequencies: EXTERNAL_FREQUENCIES = EXTERNAL_FREQUENCIES(), clinvar: CLINVAR = CLINVAR(), rsnumber: String = "rs200676709", dna_change: String = "T>C", max_impact_score: Int = 10, genes: Set[GENES] = ..., cmc: CMC = CMC(), variant_external_reference: Seq[String] = Seq("DBSNP", "Clinvar", "Cosmic"), gene_external_reference: Seq[String] = ...) extends Product with Serializable
11.  case class PreparedVariantSugggestions(type: String = "variant", locus: String = "1-69897-T-C", suggestion_id: String = ..., hgvsg: String = "chr1:g.69897T>C", suggest: Seq[SUGGEST] = ..., chromosome: String = "1", rsnumber: String = "rs200676709", symbol_aa_change: Seq[String] = ...) extends Product with Serializable
12.  case class SUGGEST(input: Seq[String] = ..., weight: Int = 4) extends Product with Serializable