String source
The source file's location in Amazon S3.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String destinationName
The job's destination annotation store.
String id
The job's ID.
String roleArn
The job's service role ARN.
Boolean runLeftNormalization
The job's left normalization setting.
String status
The job's status.
Date updateTime
When the job was updated.
Date creationTime
The store's creation time.
String description
The store's description.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
SseConfig sseConfig
The store's server-side encryption (SSE) settings.
String status
The store's status.
String statusMessage
The store's status message.
String storeArn
The store's ARN.
String storeFormat
The store's file format.
Long storeSizeBytes
The store's size in bytes.
Date updateTime
When the store was updated.
String jobId
The job's ID.
String id
The run's ID.
String jobId
The job's ID.
String description
A description for the store.
String name
A name for the store.
ReferenceItem reference
The genome reference for the store's annotations.
SseConfig sseConfig
Server-side encryption (SSE) settings for the store.
String storeFormat
The annotation file format of the store.
StoreOptions storeOptions
File parsing options for the annotation store.
Map<K,V> tags
Tags for the store.
Date creationTime
When the store was created.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference. Required for all stores except TSV format with generic annotations.
String status
The store's status.
String storeFormat
The annotation file format of the store.
StoreOptions storeOptions
The store's file parsing options.
String clientToken
To ensure that requests don't run multiple times, specify a unique token for each request.
String description
A description for the store.
String name
A name for the store.
SseConfig sseConfig
Server-side encryption (SSE) settings for the store.
Map<K,V> tags
Tags for the store.
Integer maxCpus
The maximum number of CPUs to use in the group.
Integer maxDuration
A maximum run time for the group in minutes.
Integer maxRuns
The maximum number of concurrent runs for the group.
String name
A name for the group.
String requestId
To ensure that requests don't run multiple times, specify a unique ID for each request.
Map<K,V> tags
Tags for the group.
String clientToken
To ensure that requests don't run multiple times, specify a unique token for each request.
String description
A description for the store.
String name
A name for the store.
SseConfig sseConfig
Server-side encryption (SSE) settings for the store.
Map<K,V> tags
Tags for the store.
String description
A description for the store.
String name
A name for the store.
ReferenceItem reference
The genome reference for the store's variants.
SseConfig sseConfig
Server-side encryption (SSE) settings for the store.
Map<K,V> tags
Tags for the store.
Date creationTime
When the store was created.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
String status
The store's status.
String definitionUri
The URI of a definition for the workflow.
ByteBuffer definitionZip
A ZIP archive for the workflow.
String description
A description for the workflow.
String engine
An engine for the workflow.
String main
The path of the main definition file for the workflow.
String name
A name for the workflow.
Map<K,V> parameterTemplate
A parameter template for the workflow.
String requestId
To ensure that requests don't run multiple times, specify a unique ID for each request.
Integer storageCapacity
A storage capacity for the workflow in gigabytes.
Map<K,V> tags
Tags for the workflow.
String status
The store's status.
String id
The store's ID.
String id
The run group's ID.
String id
The run's ID.
String id
The sequence store's ID.
String status
The store's status.
String id
The workflow's ID.
String readSetId
The set's ID.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String destination
The job's destination in Amazon S3.
String id
The job's ID.
String sequenceStoreId
The job's sequence store ID.
String status
The job's status.
TsvOptions tsvOptions
Options for a TSV file.
VcfOptions vcfOptions
Options for a VCF file.
String jobId
The job's ID.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String destinationName
The job's destination annotation store.
FormatOptions formatOptions
String id
The job's ID.
List<E> items
The job's imported items.
String roleArn
The job's service role ARN.
Boolean runLeftNormalization
The job's left normalization setting.
String status
The job's status.
String statusMessage
The job's status message.
Date updateTime
When the job was updated.
String name
The store's name.
Date creationTime
When the store was created.
String description
The store's description.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
SseConfig sseConfig
The store's server-side encryption (SSE) settings.
String status
The store's status.
String statusMessage
A status message.
String storeArn
The store's ARN.
String storeFormat
The store's annotation file format.
StoreOptions storeOptions
The store's parsing options.
Long storeSizeBytes
The store's size in bytes.
Map<K,V> tags
The store's tags.
Date updateTime
When the store was updated.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String id
The job's ID.
String sequenceStoreId
The job's sequence store ID.
List<E> sources
The job's source files.
String status
The job's status.
String statusMessage
The job's status message.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String destination
The job's destination in Amazon S3.
String id
The job's ID.
List<E> readSets
The job's read sets.
String sequenceStoreId
The job's sequence store ID.
String status
The job's status.
String statusMessage
The job's status message.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String id
The job's ID.
String roleArn
The job's service role ARN.
String sequenceStoreId
The job's sequence store ID.
List<E> sources
The job's source files.
String status
The job's status.
String statusMessage
The job's status message.
String arn
The read set's ARN.
Date creationTime
When the read set was created.
String description
The read set's description.
String fileType
The read set's file type.
ReadSetFiles files
The read set's files.
String id
The read set's ID.
String name
The read set's name.
String referenceArn
The read set's genome reference ARN.
String sampleId
The read set's sample ID.
SequenceInformation sequenceInformation
The read set's sequence information.
String sequenceStoreId
The read set's sequence store ID.
String status
The read set's status.
String subjectId
The read set's subject ID.
InputStream payload
The read set file payload.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String id
The job's ID.
String referenceStoreId
The job's reference store ID.
String roleArn
The job's service role ARN.
List<E> sources
The job's source files.
String status
The job's status.
String statusMessage
The job's status message.
String arn
The reference's ARN.
Date creationTime
When the reference was created.
String description
The reference's description.
ReferenceFiles files
The reference's files.
String id
The reference's ID.
String md5
The reference's MD5 checksum.
String name
The reference's name.
String referenceStoreId
The reference's reference store ID.
String status
The reference's status.
Date updateTime
When the reference was updated.
InputStream payload
The reference file payload.
String id
The store's ID.
String id
The group's ID.
String arn
The group's ARN.
Date creationTime
When the group was created.
String id
The group's ID.
Integer maxCpus
The group's maximum number of CPUs to use.
Integer maxDuration
The group's maximum run time in minutes.
Integer maxRuns
The maximum number of concurrent runs for the group.
String name
The group's name.
Map<K,V> tags
The group's tags.
String arn
The run's ARN.
Date creationTime
When the run was created.
String definition
The run's definition.
String digest
The run's digest.
String id
The run's ID.
String logLevel
The run's log level.
String name
The run's name.
String outputUri
The run's output URI.
Integer priority
The run's priority.
Map<K,V> resourceDigests
The run's resource digests.
String roleArn
The run's service role ARN.
String runGroupId
The run's group ID.
String runId
The run's ID.
Date startTime
When the run started.
String startedBy
Who started the run.
String status
The run's status.
String statusMessage
The run's status message.
Date stopTime
The run's stop time.
Integer storageCapacity
The run's storage capacity in gigabytes.
Map<K,V> tags
The run's tags.
String workflowId
The run's workflow ID.
String workflowType
The run's workflow type.
Integer cpus
The task's CPU usage.
Date creationTime
When the task was created.
String logStream
The task's log stream.
Integer memory
The task's memory use in gigabytes.
String name
The task's name.
Date startTime
The task's start time.
String status
The task's status.
String statusMessage
The task's status message.
Date stopTime
The task's stop time.
String taskId
The task's ID.
String id
The store's ID.
String jobId
The job's ID.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String destinationName
The job's destination variant store.
String id
The job's ID.
List<E> items
The job's items.
String roleArn
The job's service role ARN.
Boolean runLeftNormalization
The job's left normalization setting.
String status
The job's status.
String statusMessage
The job's status message.
Date updateTime
When the job was updated.
String name
The store's name.
Date creationTime
When the store was created.
String description
The store's description.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
SseConfig sseConfig
The store's server-side encryption (SSE) settings.
String status
The store's status.
String statusMessage
The store's status message.
String storeArn
The store's ARN.
Long storeSizeBytes
The store's size in bytes.
Map<K,V> tags
The store's tags.
Date updateTime
When the store was updated.
String arn
The workflow's ARN.
Date creationTime
When the workflow was created.
String definition
The workflow's definition.
String description
The workflow's description.
String digest
The workflow's digest.
String engine
The workflow's engine.
String id
The workflow's ID.
String main
The path of the main definition file for the workflow.
String name
The workflow's name.
Map<K,V> parameterTemplate
The workflow's parameter template.
String status
The workflow's status.
String statusMessage
The workflow's status message.
Integer storageCapacity
The workflow's storage capacity in gigabytes.
Map<K,V> tags
The workflow's tags.
String type
The workflow's type.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String id
The job's ID.
String roleArn
The job's service role ARN.
String sequenceStoreId
The job's sequence store ID.
String status
The job's status.
String description
The source's description.
String generatedFrom
Where the source originated.
String name
The source's name.
String referenceArn
The source's genome reference ARN.
String sampleId
The source's sample ID.
String sourceFileType
The source's file type.
SourceFiles sourceFiles
The source files' location in Amazon S3.
String status
The source's status.
String statusMessage
The source's status message.
String subjectId
The source's subject ID.
Map<K,V> tags
The source's tags.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String id
The job's ID.
String referenceStoreId
The job's reference store ID.
String roleArn
The job's service role ARN.
String status
The job's status.
String description
The source's description.
String name
The source's name.
String sourceFile
The source file's location in Amazon S3.
String status
The source's status.
String statusMessage
The source's status message.
Map<K,V> tags
The source's tags.
ListAnnotationImportJobsFilter filter
A filter to apply to the list.
List<E> ids
IDs of annotation import jobs to retrieve.
Integer maxResults
The maximum number of jobs to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String status
A status to filter on.
ListAnnotationStoresFilter filter
A filter to apply to the list.
List<E> ids
IDs of stores to list.
Integer maxResults
The maximum number of stores to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
ActivateReadSetFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of read set activation jobs to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String sequenceStoreId
The read set's sequence store ID.
ExportReadSetFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of jobs to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String sequenceStoreId
The jobs' sequence store ID.
ImportReadSetFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of jobs to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String sequenceStoreId
The jobs' sequence store ID.
ReadSetFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of read sets to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String sequenceStoreId
The jobs' sequence store ID.
ImportReferenceFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of jobs to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String referenceStoreId
The job's reference store ID.
ReferenceFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of references to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String referenceStoreId
The references' reference store ID.
ReferenceStoreFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of stores to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
Integer maxResults
The maximum number of runs to return in one page of results.
String name
Filter the list by run name.
String runGroupId
Filter the list by run group ID.
String startingToken
Specify the pagination token from a previous request to retrieve the next page of results.
SequenceStoreFilter filter
A filter to apply to the list.
Integer maxResults
The maximum number of stores to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String resourceArn
The resource's ARN.
ListVariantImportJobsFilter filter
A filter to apply to the list.
List<E> ids
A list of job IDs.
Integer maxResults
The maximum number of import jobs to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String status
A status to filter on.
ListVariantStoresFilter filter
A filter to apply to the list.
List<E> ids
A list of store IDs.
Integer maxResults
The maximum number of stores to return in one page of results.
String nextToken
Specify the pagination token from a previous request to retrieve the next page of results.
String comment
The file's comment character.
String encoding
The file's encoding.
String escape
A character for escaping quotes in the file.
Boolean escapeQuotes
Whether quotes need to be escaped in the file.
Boolean header
Whether the file has a header row.
String lineSep
A line separator for the file.
String quote
The file's quote character.
Boolean quoteAll
Whether all values need to be quoted, or just those that contain quotes.
String sep
The file's field separator.
FileInformation index
The files' index.
FileInformation source1
The location of the first file in Amazon S3.
FileInformation source2
The location of the second file in Amazon S3.
String arn
The read set's ARN.
Date creationTime
When the read set was created.
String description
The read set's description.
String fileType
The read set's file type.
String id
The read set's ID.
String name
The read set's name.
String referenceArn
The read set's genome reference ARN.
String sampleId
The read set's sample ID.
SequenceInformation sequenceInformation
String sequenceStoreId
The read set's sequence store ID.
String status
The read set's status.
String subjectId
The read set's subject ID.
FileInformation index
The files' index.
FileInformation source
The source file's location in Amazon S3.
String referenceArn
The reference's ARN.
String arn
The reference's ARN.
Date creationTime
When the reference was created.
String description
The reference's description.
String id
The reference's ID.
String md5
The reference's MD5 checksum.
String name
The reference's name.
String referenceStoreId
The reference's store ID.
String status
The reference's status.
Date updateTime
When the reference was updated.
String arn
The group's ARN.
Date creationTime
When the group was created.
String id
The group's ID.
Integer maxCpus
The group's maximum CPU count setting.
Integer maxDuration
The group's maximum duration setting in minutes.
Integer maxRuns
The group's maximum concurrent run setting.
String name
The group's name.
String arn
The run's ARN.
Date creationTime
When the run was created.
String id
The run's ID.
String name
The run's name.
Integer priority
The run's priority.
Date startTime
When the run started.
String status
The run's status.
Date stopTime
When the run stopped.
Integer storageCapacity
The run's storage capacity.
String workflowId
The run's workflow ID.
String destinationName
A destination annotation store for the job.
FormatOptions formatOptions
Formatting options for the annotation file.
List<E> items
Items to import.
String roleArn
A service role for the job.
Boolean runLeftNormalization
The job's left normalization setting.
String jobId
The job's ID.
String readSetId
The source's read set ID.
String clientToken
To ensure that jobs don't run multiple times, specify a unique token for each job.
String destination
A location for exported files in Amazon S3.
String roleArn
A service role for the job.
String sequenceStoreId
The read set's sequence store ID.
List<E> sources
The job's source files.
String description
The source's description.
String generatedFrom
Where the source originated.
String name
The source's name.
String referenceArn
The source's reference ARN.
String sampleId
The source's sample ID.
String sourceFileType
The source's file type.
SourceFiles sourceFiles
The source files' location in Amazon S3.
String subjectId
The source's subject ID.
Map<K,V> tags
The source's tags.
String logLevel
A log level for the run.
String name
A name for the run.
String outputUri
An output URI for the run.
Integer priority
A priority for the run.
String requestId
To ensure that requests don't run multiple times, specify a unique ID for each request.
String roleArn
A service role for the run.
String runGroupId
The run's group ID.
String runId
The run's ID.
Integer storageCapacity
A storage capacity for the run in gigabytes.
Map<K,V> tags
Tags for the run.
String workflowId
The run's workflow ID.
String workflowType
The run's workflows type.
String jobId
The job's ID.
TsvStoreOptions tsvStoreOptions
File settings for a TSV store.
Integer cpus
The task's CPU count.
Date creationTime
When the task was created.
Integer memory
The task's memory use in gigabyes.
String name
The task's name.
Date startTime
When the task started.
String status
The task's status.
Date stopTime
When the task stopped.
String taskId
The task's ID.
ReadOptions readOptions
The file's read options.
Date creationTime
When the store was created.
String description
The store's description.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
String status
The store's status.
String storeFormat
The annotation file format of the store.
StoreOptions storeOptions
Parsing options for the store.
Date updateTime
When the store was updated.
Date creationTime
When the store was created.
String description
The store's description.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
String status
The store's status.
Date updateTime
When the store was updated.
String source
The source file's location in Amazon S3.
Date completionTime
When the job completed.
Date creationTime
When the job was created.
String destinationName
The job's destination variant store.
String id
The job's ID.
String roleArn
The job's service role ARN.
Boolean runLeftNormalization
The job's left normalization setting.
String status
The job's status.
Date updateTime
When the job was updated.
Date creationTime
When the store was created.
String description
The store's description.
String id
The store's ID.
String name
The store's name.
ReferenceItem reference
The store's genome reference.
SseConfig sseConfig
The store's server-side encryption (SSE) settings.
String status
The store's status.
String statusMessage
The store's status message.
String storeArn
The store's ARN.
Long storeSizeBytes
The store's size in bytes.
Date updateTime
When the store was updated.
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