Value Members

1.  final def !=(arg0: Any): Boolean

   Definition Classes

   AnyRef → Any

2.  final def ##(): Int

   Definition Classes

   AnyRef → Any

3.  final def ==(arg0: Any): Boolean

   Definition Classes

   AnyRef → Any

4.  val BIM_FILE_EXTENSION: String
5.  val BLOCKS_PER_BYTE: Int
6.  val CSV_DELIMITER_KEY: String
7.  val FAM_FILE_EXTENSION: String
8.  val MAGIC_BYTES: Seq[Byte]
9.  val NUM_MAGIC_BYTES: Int
10.  final def asInstanceOf[T0]: T0

    Definition Classes

    Any

11.  def clone(): AnyRef

    Attributes

    protected[java.lang]

    Definition Classes

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    Annotations

    @native() @throws( ... )

12.  final def eq(arg0: AnyRef): Boolean

    Definition Classes

    AnyRef

13.  def equals(arg0: Any): Boolean

    Definition Classes

    AnyRef → Any

14.  def finalize(): Unit

    Attributes

    protected[java.lang]

    Definition Classes

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    Annotations

    @throws( classOf[java.lang.Throwable] )

15.  def getBlockSize(numSamples: Int): Int
16.  final def getClass(): Class[_]

    Definition Classes

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    Annotations

    @native()

17.  def getFirstVariantIdx(partitionedFileStart: Long, blockSize: Int): Int
18.  def getNumVariants(partitionedFileStart: Long, partitionedFileLength: Long, firstVariantStart: Long, blockSize: Int): Int
19.  def getPrefixPath(bedPath: String): String
20.  def getSampleIds(bedPath: String, options: Map[String, String], hadoopConf: Configuration): Array[UTF8String]
21.  def getVariantStart(variantIdx: Int, blockSize: Int): Long
22.  def getVariants(bedPath: String, firstVariant: Int, numVariants: Int, options: Map[String, String], hadoopConf: Configuration): Array[InternalRow]
23.  def hashCode(): Int

    Definition Classes

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    Annotations

    @native()

24.  def hlsJsonBuilder(options: Map[String, Any]): String

    Attributes

    protected

    Definition Classes

    HlsUsageLogging

25.  final def isInstanceOf[T0]: Boolean

    Definition Classes

    Any

26.  def logPlinkRead(options: Map[String, String]): Unit
27.  lazy val logger: Logger

    Attributes

    protected

    Definition Classes

    LazyLogging

28.  def makeBimBoundReference(f: StructField): BoundReference
29.  def makeMutableProjection(schema: StructType): MutableProjection
30.  final def ne(arg0: AnyRef): Boolean

    Definition Classes

    AnyRef

31.  final def notify(): Unit

    Definition Classes

    AnyRef

    Annotations

    @native()

32.  final def notifyAll(): Unit

    Definition Classes

    AnyRef

    Annotations

    @native()

33.  def recordHlsEvent(tag: String, options: Map[String, Any] = Map.empty): Unit

    Definition Classes

    HlsEventRecorder

34.  def recordHlsUsage(metric: MetricDefinition, tags: Map[TagDefinition, String] = Map.empty, blob: String = null): Unit

    Attributes

    protected

    Definition Classes

    HlsUsageLogging

35.  final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes

    AnyRef

36.  def toString(): String

    Definition Classes

    AnyRef → Any

37.  def verifyBed(stream: LittleEndianDataInputStream): Unit
38.  final def wait(): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

39.  final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

40.  final def wait(arg0: Long): Unit

    Definition Classes

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    Annotations

    @native() @throws( ... )