Uses of Interface
org.semanticweb.owlapi.model.OWLOntologyManager

Packages that use OWLOntologyManager

Package	Description
com.clarkparsia.owlapi.explanation	Explanation package.
com.clarkparsia.owlapi.explanation.util	Explanation utils.
com.clarkparsia.owlapi.modularity.locality	Locality package.
org.obolibrary.macro	OBO macro package.
org.obolibrary.obo2owl	OBO to OWL.
org.semanticweb.owlapi
org.semanticweb.owlapi.apibinding	Guice modules and binding package.
org.semanticweb.owlapi.change	Ontology change classes.
org.semanticweb.owlapi.debugging	Debugging package.
org.semanticweb.owlapi.metrics	Metrics package.
org.semanticweb.owlapi.model	Main API classes.
org.semanticweb.owlapi.rdf.model	RDF model package.
org.semanticweb.owlapi.rdf.rdfxml.parser	RDF/XML syntax parser and renderer.
org.semanticweb.owlapi.util	Utilities package.
org.semanticweb.owlapitools.decomposition
uk.ac.manchester.cs.owl.explanation.ordering	Explanation ordering package.
uk.ac.manchester.cs.owl.owlapi	OWL API reference implementation package.
uk.ac.manchester.cs.owl.owlapi.concurrent	Concurrent implementation package.
uk.ac.manchester.cs.owlapi.modularity	Modularity package.

Uses of OWLOntologyManager in com.clarkparsia.owlapi.explanation

Methods in com.clarkparsia.owlapi.explanation that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	SingleExplanationGeneratorImpl.getOntologyManager()
OWLOntologyManager	SingleExplanationGenerator.getOntologyManager() Gets the ontology manager.
OWLOntologyManager	HSTExplanationGenerator.getOntologyManager()

Constructors in com.clarkparsia.owlapi.explanation with parameters of type OWLOntologyManager

Constructor and Description
DefaultExplanationGenerator(OWLOntologyManager man, OWLReasonerFactory reasonerFactory, OWLOntology ontology, ExplanationProgressMonitor progressMonitor) Instantiates a new default explanation generator.
DefaultExplanationGenerator(OWLOntologyManager man, OWLReasonerFactory reasonerFactory, OWLOntology ontology, OWLReasoner reasoner, ExplanationProgressMonitor progressMonitor) Instantiates a new default explanation generator.

Uses of OWLOntologyManager in com.clarkparsia.owlapi.explanation.util

Methods in com.clarkparsia.owlapi.explanation.util with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
static void	OntologyUtils.addAxiom(OWLAxiom axiom, Set<OWLOntology> ontologies, OWLOntologyManager manager) Deprecated. use OntologyUtils.addAxiom(OWLAxiom, Stream)

Uses of OWLOntologyManager in com.clarkparsia.owlapi.modularity.locality

Constructors in com.clarkparsia.owlapi.modularity.locality with parameters of type OWLOntologyManager

Constructor and Description
SemanticLocalityEvaluator(OWLOntologyManager man, OWLReasonerFactory reasonerFactory) Instantiates a new semantic locality evaluator.

Uses of OWLOntologyManager in org.obolibrary.macro

Constructors in org.obolibrary.macro with parameters of type OWLOntologyManager

Constructor and Description
MacroExpansionGCIVisitor(OWLOntologyManager outputManager, OWLOntology inputOntology, boolean shouldAddExpansionMarker)
MacroExpansionGCIVisitor(OWLOntology inputOntology, OWLOntologyManager outputManager, boolean preserveAnnotationsWhenExpanding)

Uses of OWLOntologyManager in org.obolibrary.obo2owl

Methods in org.obolibrary.obo2owl that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	OWLAPIOwl2Obo.getManager() Gets the manager.
OWLOntologyManager	OWLAPIObo2Owl.getManager() Gets the manager.

Methods in org.obolibrary.obo2owl with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
static void	OWLAPIObo2Owl.convertURL(String iri, String outFile, OWLOntologyManager manager) Static convenience method which: (1) creates an Obo2Owl bridge object (2) parses an obo file from a URL (3) converts that to an OWL ontology (4) saves the OWL ontology as RDF/XML.
static void	OWLAPIObo2Owl.convertURL(String iri, String outFile, String defaultOnt, OWLOntologyManager manager) See.
void	OWLAPIOwl2Obo.setManager(OWLOntologyManager manager) Sets the manager.
void	OWLAPIObo2Owl.setManager(OWLOntologyManager manager) Sets the manager.
static String	OwlStringTools.translate(Collection<OWLAxiom> axioms, OWLOntologyManager translationManager) Create a string for the given set of axioms.
static Collection<OWLAxiom>	OwlStringTools.translate(String axioms, OWLOntologyManager translationManager) Parse the axioms from the given axiom string.

Constructors in org.obolibrary.obo2owl with parameters of type OWLOntologyManager

Constructor and Description
OWLAPIObo2Owl(OWLOntologyManager manager) Instantiates a new oWLAPI obo2 owl.
OWLAPIOwl2Obo(OWLOntologyManager translationManager) Instantiates a new oWLAPI owl2 obo.

Uses of OWLOntologyManager in org.semanticweb.owlapi

Methods in org.semanticweb.owlapi with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
ManchesterOWLSyntaxParser	OWLAPIParsersModule.provideManchesterSyntaxParser(OWLDataFactory df, OWLOntologyManager provider)

Uses of OWLOntologyManager in org.semanticweb.owlapi.apibinding

Methods in org.semanticweb.owlapi.apibinding that return OWLOntologyManager

Modifier and Type	Method and Description
static OWLOntologyManager	OWLManager.createConcurrentOWLOntologyManager() Creates an OWL ontology manager that is configured with the standard parsers and storers and provides locking for concurrent access.
static OWLOntologyManager	OWLManager.createOWLOntologyManager() Creates an OWL ontology manager that is configured with standard parsers, storeres etc.
static OWLOntologyManager	OWLManager.createOWLOntologyManager(Object injector) Creates an OWL ontology manager that is configured with the standard parsers and storers and provides locking for concurrent access.
OWLOntologyManager	OWLManager.get()

Methods in org.semanticweb.owlapi.apibinding with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
static OWLOntology	OWLFunctionalSyntaxFactory.Ontology(OWLOntologyManager man, OWLAxiom... axioms)

Uses of OWLOntologyManager in org.semanticweb.owlapi.change

Methods in org.semanticweb.owlapi.change with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyChange	OWLOntologyChangeRecord.createOntologyChange(OWLOntologyManager manager) Creates an OWLOntologyChange from the OWLOntologyID and OWLOntologyChangeData associated with this OWLOntologyChangeRecord object.

Constructors in org.semanticweb.owlapi.change with parameters of type OWLOntologyManager

Constructor and Description
CoerceConstantsIntoDataPropertyRange(OWLOntologyManager m, Collection<OWLOntology> ontologies) Instantiates a new coerce constants into data property range.
ShortForm2AnnotationGenerator(OWLDataFactory df, OWLOntologyManager ontologyManager, OWLOntology ontology, ShortFormProvider shortFormProvider, IRI annotationIRI) Instantiates a new short form2 annotation generator.
ShortForm2AnnotationGenerator(OWLDataFactory df, OWLOntologyManager ontologyManager, OWLOntology ontology, ShortFormProvider shortFormProvider, IRI annotationIRI, String languageTag) Instantiates a new short form2 annotation generator.

Uses of OWLOntologyManager in org.semanticweb.owlapi.debugging

Constructors in org.semanticweb.owlapi.debugging with parameters of type OWLOntologyManager

Constructor and Description
BlackBoxOWLDebugger(OWLOntologyManager owlOntologyManager, OWLOntology ontology, OWLReasonerFactory reasonerFactory) Instantiates a new black box owl debugger.

Uses of OWLOntologyManager in org.semanticweb.owlapi.metrics

Methods in org.semanticweb.owlapi.metrics that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	OWLMetric.getManager() Gets the ontology manager which, amongst other things can be used to obtain the imports closure of the current ontology.
OWLOntologyManager	AbstractOWLMetric.getManager()

Uses of OWLOntologyManager in org.semanticweb.owlapi.model

Methods in org.semanticweb.owlapi.model that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	OWLOntologyManagerFactory.get() Creates a new ontology manager.
OWLOntologyManager	OWLOntology.getOWLOntologyManager() Gets the manager that manages this ontology.

Methods in org.semanticweb.owlapi.model with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
OWLOntology	OWLOntologyBuilder.createOWLOntology(OWLOntologyManager manager, OWLOntologyID ontologyID)
OWLOntology	OWLOntologyFactory.createOWLOntology(OWLOntologyManager manager, OWLOntologyID ontologyID, IRI documentIRI, OWLOntologyFactory.OWLOntologyCreationHandler handler) Creates an (empty) ontology.
OWLOntology	OWLOntologyFactory.loadOWLOntology(OWLOntologyManager manager, OWLOntologyDocumentSource documentSource, OWLOntologyFactory.OWLOntologyCreationHandler handler, OWLOntologyLoaderConfiguration configuration) Creates and loads an OWLOntology.
void	OWLOntology.setOWLOntologyManager(OWLOntologyManager manager) Sets the manager for this ontology.

Uses of OWLOntologyManager in org.semanticweb.owlapi.rdf.model

Constructors in org.semanticweb.owlapi.rdf.model with parameters of type OWLOntologyManager

Constructor and Description
AbstractTranslator(OWLOntologyManager manager, OWLOntology ontology, boolean useStrongTyping, IndividualAppearance multiple)
RDFTranslator(OWLOntologyManager manager, OWLOntology ontology, boolean useStrongTyping, IndividualAppearance occurrences, AxiomAppearance axiomOccurrences, AtomicInteger counter)

Uses of OWLOntologyManager in org.semanticweb.owlapi.rdf.rdfxml.parser

Methods in org.semanticweb.owlapi.rdf.rdfxml.parser that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	OWLRDFConsumer.getOWLOntologyManager() Gets the oWL ontology manager.

Uses of OWLOntologyManager in org.semanticweb.owlapi.util

Methods in org.semanticweb.owlapi.util with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
OWLOntology	OWLOntologyMerger.createMergedOntology(OWLOntologyManager ontologyManager, IRI ontologyIRI)

Constructors in org.semanticweb.owlapi.util with parameters of type OWLOntologyManager

Constructor and Description
BidirectionalShortFormProviderAdapter(OWLOntologyManager man, Collection<OWLOntology> ontologies, ShortFormProvider shortFormProvider) Creates a BidirectionalShortFormProvider that maps between the entities that are referenced in the specified ontologies and the shortforms of these entities.
OWLEntityRenamer(OWLOntologyManager owlOntologyManager, Collection<OWLOntology> ontologies)
OWLEntityURIConverter(OWLOntologyManager manager, Collection<OWLOntology> ontologies, OWLEntityURIConverterStrategy strategy) Creates a converter that will convert the URIs of entities in the specified ontologies using the specified conversion strategy.
OWLLiteralReplacer(OWLOntologyManager owlOntologyManager, Set<OWLOntology> ontologies)
OWLObjectDesharer(OWLOntologyManager m) Creates an object duplicator that duplicates objects using the specified data factory and uri replacement map.
OWLObjectDuplicator(Map<OWLEntity,IRI> entityIRIReplacementMap, Map<OWLLiteral,OWLLiteral> literals, OWLOntologyManager m) Creates an object duplicator that duplicates objects using the specified data factory and uri replacement map.
OWLObjectDuplicator(Map<OWLEntity,IRI> entityIRIReplacementMap, OWLOntologyManager m) Creates an object duplicator that duplicates objects using the specified data factory and uri replacement map.
OWLObjectDuplicator(OWLOntologyManager m) Creates an object duplicator that duplicates objects using the specified data factory.
OWLObjectDuplicator(OWLOntologyManager m, Map<IRI,IRI> iriReplacementMap) Creates an object duplicator that duplicates objects using the specified data factory and uri replacement map.
OWLOntologyImportsClosureSetProvider(OWLOntologyManager manager, OWLOntology rootOntology) Constructs an OWLOntologySetProvider which provides a set containing the imports closure of a given ontology.
OWLOntologyIRIChanger(OWLOntologyManager owlOntologyManager)

Uses of OWLOntologyManager in org.semanticweb.owlapitools.decomposition

Constructors in org.semanticweb.owlapitools.decomposition with parameters of type OWLOntologyManager

Constructor and Description
SemanticLocalityChecker(OWLReasonerFactory f, OWLOntologyManager m) init c'tor

Uses of OWLOntologyManager in uk.ac.manchester.cs.owl.explanation.ordering

Constructors in uk.ac.manchester.cs.owl.explanation.ordering with parameters of type OWLOntologyManager

Constructor and Description
ExplanationOrdererImpl(OWLOntologyManager m) Instantiates a new explanation orderer impl.

Uses of OWLOntologyManager in uk.ac.manchester.cs.owl.owlapi

Classes in uk.ac.manchester.cs.owl.owlapi that implement OWLOntologyManager

Modifier and Type	Class and Description
class	OWLOntologyManagerImpl

Methods in uk.ac.manchester.cs.owl.owlapi that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	OWLImmutableOntologyImpl.getOWLOntologyManager()

Methods in uk.ac.manchester.cs.owl.owlapi with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
OWLOntology	OWLOntologyImplementationFactory.createOWLOntology(OWLOntologyManager manager, OWLOntologyID ontologyID)
OWLOntology	OWLOntologyFactoryImpl.createOWLOntology(OWLOntologyManager manager, OWLOntologyID ontologyID, IRI documentIRI, OWLOntologyFactory.OWLOntologyCreationHandler handler)
OWLOntology	OWLOntologyFactoryImpl.loadOWLOntology(OWLOntologyManager manager, OWLOntologyDocumentSource documentSource, OWLOntologyFactory.OWLOntologyCreationHandler handler, OWLOntologyLoaderConfiguration configuration)
void	OWLImmutableOntologyImpl.setOWLOntologyManager(OWLOntologyManager manager)

Constructors in uk.ac.manchester.cs.owl.owlapi with parameters of type OWLOntologyManager

Constructor and Description
OWLImmutableOntologyImpl(OWLOntologyManager manager, OWLOntologyID ontologyID)
OWLOntologyImpl(OWLOntologyManager manager, OWLOntologyID ontologyID)

Uses of OWLOntologyManager in uk.ac.manchester.cs.owl.owlapi.concurrent

Methods in uk.ac.manchester.cs.owl.owlapi.concurrent that return OWLOntologyManager

Modifier and Type	Method and Description
OWLOntologyManager	ConcurrentOWLOntologyImpl.getOWLOntologyManager()

Methods in uk.ac.manchester.cs.owl.owlapi.concurrent with parameters of type OWLOntologyManager

Modifier and Type	Method and Description
OWLOntology	NonConcurrentOWLOntologyBuilder.createOWLOntology(OWLOntologyManager manager, OWLOntologyID ontologyID)
OWLOntology	ConcurrentOWLOntologyBuilder.createOWLOntology(OWLOntologyManager manager, OWLOntologyID ontologyID)
void	ConcurrentOWLOntologyImpl.setOWLOntologyManager(OWLOntologyManager owlOntologyManager)

Uses of OWLOntologyManager in uk.ac.manchester.cs.owlapi.modularity

Constructors in uk.ac.manchester.cs.owlapi.modularity with parameters of type OWLOntologyManager

Constructor and Description
SyntacticLocalityModuleExtractor(OWLOntologyManager man, OWLOntology ont, ModuleType moduleType) Creates a new module extractor for a given ontology, its manager, and a specified type of locality.
SyntacticLocalityModuleExtractor(OWLOntologyManager man, Stream<OWLAxiom> axs, ModuleType moduleType) Creates a new module extractor for a subset of a given ontology, its manager, and a specified type of locality.
SyntacticLocalityModuleExtractor(OWLOntologyManager man, Stream<OWLAxiom> axs, ModuleType moduleType, boolean excludeAssertions) Creates a new module extractor for a subset of a given ontology, its manager, and a specified type of locality.