A B C D E F G H I K L M N O P R S T U V W Y

A

abandon() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

Only for the creating thread! Indicate that the writing to the endpoint has been abandoned.

abort() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileCreation

Optional method to cancel the creation

abort() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileWritingProcess

abort() - Method in class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

abort() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FileCreationWrapper

abort() - Method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

abortException - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

absMaxIndexInPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

absMinIndexInPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

AbstractSystemService - Class in org.aksw.jena_sparql_api.io.utils

AbstractSystemService() - Constructor for class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

accept(T) - Method in interface org.aksw.jena_sparql_api.io.filter.sys.ThrowingConsumer

accept(T) - Method in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

acquire(Object) - Method in interface org.aksw.jena_sparql_api.io.common.Reference

Acquire a new reference with a given comment object Acquiration fails if isAlive() returns false

acquire(Object) - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

activeEnd - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

End marker with two components (idx, pos) it is wrapped in an object to enable atomic replacement of the reference The pointer is monotonous in the sense that the end marker's logical linear location is only increased Reading an old version while a new one has been set will only cause a read to return on the old boundary, but a subsequent synchronized check for whether loading of additional data is needed is then made anyway

actualPos - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

add(PipeTransform) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PipeTransformChain

add(SysCallPipeSpec) - Method in class org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeBuilder

addJsonSerialization(Gson, JsonArray, String, Model) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

advance() - Method in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

allocateInputFile() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

allocateOutputFile() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

apply(Path) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PathToStream

apply(InputStreamOrPath) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.StreamToStream

aquisitionStackTrace - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

asStreamSource() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PathToStream

asStreamTransform() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.StreamToStream

awaitDone() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileWritingProcess

Wait for the write process to complete

awaitOrAllocateInputFileAndFilterToFile(Destination, Path) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

awaitOrAllocateInputFileAndFilterToFileCore(Single<? extends FileCreation>, Path) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

awaitOrAllocateInputFileAndFilterToStream(Destination) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

B

badCharacterTable - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

This is the version of a character table that only tracks mismatch on the first instance of a char There is another approach which uses more memory using badCharacterTable[byteValueInText][positionOfMisMatch]

badCharacterTable - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

This is the version of a character table that only tracks mismatch on the first instance of a char There is another approach which uses more memory using badCharacterTable[byteValueInText][positionOfMisMatch]

baseSeekable - Variable in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

binarySearch(BlockSource, long, long, byte, byte[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockSources

Binary search over blocks Only examines the first record in the block to decide whether to look into the next or the previous one

binarySearch(long, long, byte, byte[]) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Delimiter-based binary search.

BinarySearcher - Interface in org.aksw.jena_sparql_api.io.binseach

binarySearcher - Variable in class org.aksw.jena_sparql_api.io.binseach.GraphFromPrefixMatcher

BinarySearchOnBlockSource - Class in org.aksw.jena_sparql_api.io.binseach

BinarySearchOnBlockSource(BlockSource, AutoCloseable) - Constructor for class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnBlockSource

BinarySearchOnSortedFile - Class in org.aksw.jena_sparql_api.io.binseach

Binary search over sorted files with memory mapped IO TODO Move to a separate project as this is of general use TODO Allow cache to be shared between concurrent readers

BinarySearchOnSortedFile(AutoCloseable, Seekable, long, byte) - Constructor for class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

BinSearchScanState - Class in org.aksw.jena_sparql_api.io.binseach

State information for scanning a region once binary search has found an offset.

BinSearchScanState() - Constructor for class org.aksw.jena_sparql_api.io.binseach.BinSearchScanState

Block - Interface in org.aksw.jena_sparql_api.io.binseach

A block is a sub-sequence of bytes with a fixed finite length which however may be initially unknown, and thus has a certain horizon of explored length.

block - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

blockCache - Variable in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

BlockIterState - Class in org.aksw.jena_sparql_api.io.binseach

A helper iterator that automatically closes the previous item when next() is called.

BlockIterState(boolean, Reference<Block>, Seekable, boolean) - Constructor for class org.aksw.jena_sparql_api.io.binseach.BlockIterState

blockRef - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

blockSource - Variable in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnBlockSource

BlockSource - Interface in org.aksw.jena_sparql_api.io.binseach

blockSource - Variable in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

BlockSourceBzip2 - Class in org.aksw.jena_sparql_api.io.binseach.bz2

BlockSourceBzip2(SeekableSource, MatcherFactory, MatcherFactory) - Constructor for class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

BlockSourceFromPageManager - Class in org.aksw.jena_sparql_api.io.binseach

A block source mainly for testing the rest of the block-based machinery, such as binary search.

BlockSourceFromPageManager() - Constructor for class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

BlockSources - Class in org.aksw.jena_sparql_api.io.binseach

BlockSources() - Constructor for class org.aksw.jena_sparql_api.io.binseach.BlockSources

blockStart - Variable in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

BoyerMooreByteFromWikipedia - Class in org.aksw.jena_sparql_api.io.deprecated

BoyerMooreByteFromWikipedia() - Constructor for class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

BoyerMooreMatcher - Class in org.aksw.jena_sparql_api.io.deprecated

BoyerMooreMatcher(boolean, byte[], int[], int[]) - Constructor for class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

BoyerMooreMatcherFactory - Class in org.aksw.jena_sparql_api.io.deprecated

BoyerMooreMatcherFactory(boolean, boolean, byte[], int[], int[]) - Constructor for class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

BucketPointer(int, int) - Constructor for class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.BucketPointer

buckets - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

The buffered data

bufferForPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

BufferFromInputStream - Class in org.aksw.jena_sparql_api.io.binseach

Implementation of a byte array that caches data in buckets from an InputStream.

BufferFromInputStream(int, InputStream) - Constructor for class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

BufferFromInputStream.BucketPointer - Class in org.aksw.jena_sparql_api.io.binseach

BufferFromInputStream.ByteArrayChannel - Class in org.aksw.jena_sparql_api.io.binseach

build() - Method in class org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeBuilder

buildCheckCmd() - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderGzip

buildCheckCmd() - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderLbZip

buildCheckCmd() - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

buildCheckCmd() - Method in interface org.aksw.jena_sparql_api.io.filter.sys.SysCallFn

buildCmdForFileToFile(Path, Path) - Method in interface org.aksw.jena_sparql_api.io.filter.sys.SysCallFn

buildCmdForFileToStream(Path) - Method in interface org.aksw.jena_sparql_api.io.filter.sys.SysCallFn

buildCmdForStreamToFile(Path) - Method in interface org.aksw.jena_sparql_api.io.filter.sys.SysCallFn

buildCmdForStreamToStream() - Method in interface org.aksw.jena_sparql_api.io.filter.sys.SysCallFn

buildDecodeCmd(Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderGzip

buildDecodeCmd(Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderLbZip

buildDecodeCmd(Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

buildEncodeCmd(Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderGzip

buildEncodeCmd(Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderLbZip

buildEncodeCmd(Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

bwd(boolean, Reference<Block>, Seekable) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

bwdMagicPattern - Static variable in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

ByteArrayChannel(long, BufferFromInputStream.BucketPointer) - Constructor for class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

ByteBufferSupplier - Interface in org.aksw.jena_sparql_api.io.binseach

Interface for mapping a position to a corresponding byte buffer

ByteBufferSupplierPaged - Class in org.aksw.jena_sparql_api.io.binseach

ByteBufferSupplierPaged() - Constructor for class org.aksw.jena_sparql_api.io.binseach.ByteBufferSupplierPaged

ByteSink - Interface in org.aksw.jena_sparql_api.io.endpoint

byteSource - Variable in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromByteSource

C

cache(long, Seekable) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

cancelAction - Variable in class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

cancelCreation() - Method in interface org.aksw.jena_sparql_api.io.endpoint.Destination

Cancel the creation of a destination's byte source.

cancelCreation() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

Cancels this destination's underlying fileCreation process and cancel it Has no effect if the process already completed

canNextPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

canPrevPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Chainer - Class in org.aksw.jena_sparql_api.io.endpoint

Chainer() - Constructor for class org.aksw.jena_sparql_api.io.endpoint.Chainer

channel - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

channel - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

ChannelFactory<T extends Channel> - Interface in org.aksw.jena_sparql_api.io.api

channelFactory - Variable in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

channelSize - Variable in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

channelSize - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

We rely on the channel's size being constant.

charAt(int) - Method in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

charAt(int) - Method in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

CharSequenceFromSeekable - Class in org.aksw.jena_sparql_api.io.binseach

CharSequenceFromSeekable(Seekable) - Constructor for class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

CharSequenceFromSeekable(Seekable, int, int) - Constructor for class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

checkNext(int, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

checkNext(int, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

checkNext(int, boolean) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Attempt to advance the position by the given number of bytes.

checkNext(int, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

checkPrev(int, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

The method assumes that the current position is in the valid range

checkPrev(int, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

checkPrev(int, boolean) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

checkPrev(int, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

checkRelease() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

childRefs - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

clientQueue - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

clone() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

clone() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Clone the state of the navigator, allowing independent positioning

clone() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

clone() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

cloneObject() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Default method to work around scala bug https://github.com/scala/bug/issues/10501

close() - Method in interface org.aksw.jena_sparql_api.io.binseach.BinarySearcher

close() - Method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnBlockSource

close() - Method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

close() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

close() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

close() - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromPrefixMatcher

close() - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

close() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

close() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

close() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

close() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

Supply data to the channel, which will be returned by read operations in sequence

close() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

close() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

close() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

close() - Method in class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

close() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

close() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

closeAction - Variable in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnBlockSource

closeAction - Variable in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

closeAction - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

closeAction - Variable in class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

closeActionRun - Variable in class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

closeCurrent() - Method in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

closeWithIOException(AutoCloseable) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockSources

cmd - Variable in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

cmdBuilderPathToPath() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeSpec

cmdBuilderPathToStream() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeSpec

cmdBuilderStreamToPath() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeSpec

cmdExists() - Method in interface org.aksw.jena_sparql_api.conjure.entity.utils.PathCoder

cmdExists() - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderNativBzip

cmdExists() - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

cmdFactory - Variable in class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

cmdFactory - Variable in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

cmdStreamToStream() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeSpec

coders - Variable in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderRegistry

comment - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

compareArrays(byte[], byte[]) - Static method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

compareToPrefix(byte[]) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

compareToPrefix(byte[]) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Compare the bytes at the current position to a given sequence of bytes If there are fewer bytes available in the seekable than provide for comparison, then only that many are compared.

compareToPrefix(byte[]) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

complete() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

ConcurrentFileEndpoint - Class in org.aksw.jena_sparql_api.io.endpoint

Class for allowing an arbitrary number of concurrent reads to a file while it is being written to.

ConcurrentFileEndpoint(Path, SeekableByteChannel) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

ConcurrentFileReader - Class in org.aksw.jena_sparql_api.io.endpoint

A wrapper for a channel that blocks upon reaching the end of its channel When there is no more data, the reader can either waits for a notify on referenceChannel.

ConcurrentFileReader(Channel, SeekableByteChannel, Integer) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

contentAtOrAfter(long, boolean) - Method in interface org.aksw.jena_sparql_api.io.binseach.BlockSource

contentAtOrAfter(long, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

contentAtOrAfter(long, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

contentAtOrBefore(long, boolean) - Method in interface org.aksw.jena_sparql_api.io.binseach.BlockSource

contentAtOrBefore(long, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

contentAtOrBefore(long, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

create(Path) - Static method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

create(InputStream, int, int...) - Static method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

create(SeekableSource) - Static method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

create(FileChannel) - Static method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

create(FileChannel, int) - Static method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

create(T, AutoCloseable, Object) - Static method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

create(boolean) - Static method in class org.aksw.jena_sparql_api.io.deprecated.MatcherFactoryForBytes

create(Path, OpenOption...) - Static method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

create(Path, Channel, Integer) - Static method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

create() - Method in class org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeBuilder

createBadCharacterTable(byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

createBinarySearcherBz2(Path) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockSources

createBinarySearcherBz2(FileChannel, boolean) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockSources

createBwd(byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

createBwd(byte[], boolean) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

createClosed() - Static method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

createFileCreation(Process, Path) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

createFwd(byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

createFwd(byte[], boolean) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

createGoodSuffixTable(byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

Makes the jump table based on the scan offset which mismatch occurs.

createInputSplits(BlockSource) - Static method in class org.aksw.jena_sparql_api.io.split.InputSplits

createInputSplits(FileChannel) - Static method in class org.aksw.jena_sparql_api.io.split.InputSplits

createPipedTransformer(BiConsumer<InputStream, OutputStream>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

TODO Move this method elsewhere as it does not make use of a process Transformation using a piped input/outputstream createPipedTransform((in, out) -> { for(item : () -> readItems(in)) { write(item); } )

createSplits(long, int) - Static method in class org.aksw.jena_sparql_api.io.split.InputSplits

createStarted(Path, Single<Integer>) - Static method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

Calling this method will subscribe to the single (on Schedulers.io()) and thus start its attached process

currentBlock - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

currentBlockRef - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

currentBuffer - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

currentDelimPos - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

currentReadChannel - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

currentSeekable - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

D

dataset - Variable in class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

datasetSupplier - Variable in class org.aksw.jena_sparql_api.io.json.TypeAdapterDataset

dataSupplier - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

Supplier for additional data

decode(Path, Path) - Method in interface org.aksw.jena_sparql_api.conjure.entity.utils.PathCoder

decode(Path, Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderNativBzip

decode(Path, Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

DecodedDataBlock - Class in org.aksw.jena_sparql_api.io.binseach

DecodedDataBlock(BlockSource, long, ChannelFactory<Seekable>) - Constructor for class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

delegate - Variable in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

delegate - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

delegate - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherDelegate

delimiter - Variable in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

delimiter - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

delimiter - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

The byte which to match

deltaPos(int) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Relative positioning.

Destination - Interface in org.aksw.jena_sparql_api.io.endpoint

Every destination must be usable as a supplier for input streams.

destination - Variable in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

DestinationFilter - Class in org.aksw.jena_sparql_api.io.endpoint

DestinationFilter(FilterConfig) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

DestinationFromByteSource - Class in org.aksw.jena_sparql_api.io.endpoint

DestinationFromByteSource(ByteSource) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.DestinationFromByteSource

DestinationFromFile - Class in org.aksw.jena_sparql_api.io.endpoint

Destination from an existing file

DestinationFromFile(Path) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

DestinationFromFileCreation - Class in org.aksw.jena_sparql_api.io.endpoint

Destination of a file that does not yet exist

DestinationFromFileCreation(Path, Single<? extends FileCreation>) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

DestinationFromSwitch - Class in org.aksw.jena_sparql_api.io.endpoint

Switching destination If a file for a DestinationFromFileCreation finishes, it can replace itself with a DestinationFromFile Right now I am not sure whether this is useful: If a stream is requested, it has to do all the preparation work anyway If we think of a source + filter as a virtual source, then it is actually ok: Let's not forget that a destination is a supplier for input streams Repeatedly executing such a workflow may re-use prior generated files instead of repeating the process again from the source file However, the purpose of this framework is not to do full caching, but only abstract java and system filters, but allow controlling what should happen with the files in case they get generated.

DestinationFromSwitch() - Constructor for class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

Destinations - Class in org.aksw.jena_sparql_api.io.endpoint

Destinations() - Constructor for class org.aksw.jena_sparql_api.io.endpoint.Destinations

displacement - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

displacement - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

disposable - Variable in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

doRead(BufferFromInputStream.ByteArrayChannel, ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

E

encode(Path, Path) - Method in interface org.aksw.jena_sparql_api.conjure.entity.utils.PathCoder

encode(Path, Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderNativBzip

encode(Path, Path) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

end - Variable in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

end - Variable in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

endpoint - Variable in class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

engine - Variable in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

ensureCapacityInActiveBucket() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

equals(Object) - Method in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

execStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

execStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

Ideally, premature closing of the input stream should propagate upstream and terminate any transformation processes upstream

execStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.InputStreamSupplier

execStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.InputStreamSupplierBasic

execStream() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

Actually execute the filter Because we always prefer streams over files (which get passed as arguments), we check the availability and applicability of commands of the cmdFactory in the following order: - stream to stream - stream to file (we can stream the file being generated) - file to stream - file to file the 'file to stream' cases will try to reuse files under generation in the source destination Invokes ifNeedsFileInput and ifNeedsFileOutput handlers as needed

execToHotFile(Path) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

Execute the stream and write the result to a hot file TODO What if the input is a hot file? We can wait for file completion or we can connect to its stream.

execute() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

executeCore() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

executeFuture() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

executeReadLines(Flowable<String>, FlowableEmitter<String>) - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

exposedStartPos - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

The start position exposed - may be non-zero or even negative!

extractKnownPathFromDestination(Destination) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

F

fileBeingCreated - Variable in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

The disposable of the fileCreation

FileConverterConfig - Interface in org.aksw.jena_sparql_api.io.endpoint

fileCreation - Variable in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

FileCreation - Interface in org.aksw.jena_sparql_api.io.endpoint

An active process that creates a file

FileCreationWrapper - Class in org.aksw.jena_sparql_api.io.filter.sys

Wrap an existing file as a FileCreation that has completed

FileCreationWrapper(Path) - Constructor for class org.aksw.jena_sparql_api.io.filter.sys.FileCreationWrapper

FileDestination - Interface in org.aksw.jena_sparql_api.io.endpoint

FileWritingProcess - Interface in org.aksw.jena_sparql_api.io.endpoint

filter - Variable in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

Filter - Interface in org.aksw.jena_sparql_api.io.filter

In an ideal world, we could transform any stream of data to another stream using a transformation function like Function However, in practice, we sometimes need to write intermediate files: - A filter may not natively support streaming input and needs to save it as a file first - A filter may not natively support streaming output and needs to serve it from a file - It may be more efficient to pass data to filters as files - without the jvm in between So a filter becomes more of a Function And finally, we want to control file creation if it has to happen

FilterBuilder - Interface in org.aksw.jena_sparql_api.io.endpoint

FilterConfig - Interface in org.aksw.jena_sparql_api.io.endpoint

FilterEngine - Interface in org.aksw.jena_sparql_api.io.endpoint

An engine is a factory for executions that process input to output.

FilterEngineFromSysFunction - Class in org.aksw.jena_sparql_api.io.filter.sys

FilterEngineFromSysFunction(SysCallFn) - Constructor for class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

FilterEngineJava - Class in org.aksw.jena_sparql_api.io.endpoint

FilterEngineJava(Function<InputStream, InputStream>) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

FilterExecutionFromSysFunction - Class in org.aksw.jena_sparql_api.io.filter.sys

FilterExecutionFromSysFunction(SysCallFn, Destination) - Constructor for class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

FilterExecutionJava - Class in org.aksw.jena_sparql_api.io.endpoint

FilterExecutionJava(Function<InputStream, InputStream>, Destination) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

filterMetadata - Variable in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

FilterMetadata - Interface in org.aksw.jena_sparql_api.io.filter.sys

finalize() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

TODO Switch to Java 9 Cleaner once we upgrade

find(Seekable) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherDelegate

find(Seekable) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

find(Seekable) - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

find(Seekable) - Method in interface org.aksw.jena_sparql_api.io.deprecated.SeekableMatcher

Move the position to the next match.

firstDistinguishedItem - Variable in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

forceDestinationToFile(Single<InputStreamSupplier>, Path) - Static method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

forceInputFileCreation(Destination) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

forInput(FilterConfig) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterEngine

Pipe data from a prior filter into this one

forInput(Path) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterEngine

forInput(InputStreamSupplier) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterEngine

forInput(Destination) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterEngine

forInput(Single<Path>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterEngine

Create an input from a file that is currently written to.

forInput(InputStream) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterEngine

Ideally input should be source-like: sources are idle entities (do not need to be closed by the engine) that allow for creation of as many input streams as desired.

forInput(Path) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

forInput(InputStreamSupplier) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

forInput(Single<Path>) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

forInput(FilterConfig) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

forInput(Destination) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

forInput(Path) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

forInput(InputStreamSupplier) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

forInput(FilterConfig) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

forInput(Single<Path>) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

forInput(Destination) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterEngineFromSysFunction

forStrings(int, Consumer<String>) - Static method in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

from(Path) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

from(InputStream) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

fromByteSource(ByteSource) - Static method in class org.aksw.jena_sparql_api.io.endpoint.Destinations

fromCmdStreamToStream(String...) - Static method in interface org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeSpec

fromFile(Path) - Static method in class org.aksw.jena_sparql_api.io.endpoint.Destinations

fromSortedNtriplesBzip2File(Path) - Static method in class org.aksw.jena_sparql_api.io.lib.SpecialGraphs

fromSortedNtriplesFile(Path) - Static method in class org.aksw.jena_sparql_api.io.lib.SpecialGraphs

fromSysCallStreamToStream(String...) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

future() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileCreation

A completable future that fires when the file creation is complete or an exception occurred

future() - Method in class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

future - Variable in class org.aksw.jena_sparql_api.io.filter.sys.FileCreationWrapper

future() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FileCreationWrapper

future() - Method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

fwd(boolean, Reference<Block>, Seekable) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

fwd(boolean, Reference<Block>) - Static method in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

fwdMagicPattern - Static variable in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

G

get() - Static method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderRegistry

get() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

get(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.ByteBufferSupplier

get() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Get the byte at the current position Does not change the position Throws an exception if beyond end of data

get(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Move to 1 byte beyond the know end

get() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Read a byte at the current position

get() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

get(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.SeekableSource

get(long) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableSourceFromPageManager

get() - Method in interface org.aksw.jena_sparql_api.io.common.Reference

Get the referent

get() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

get() - Method in interface org.aksw.jena_sparql_api.io.common.ResourceHolder

get() - Method in class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

get() - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngineNative

getAquisitionStackTrace() - Method in interface org.aksw.jena_sparql_api.io.common.Reference

Optional operation.

getAquisitionStackTrace() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

getBlockStart() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

getBufferForPage(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

If a page with the given offset exists, the following fields are updated: - displacement - absMinIndexInPage - absMaxIndexInPage Note, that the relative caches are not updated

getBufferForPos(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getBufferSource() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

getByte(Seekable) - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

getChannelFactory() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

getCoder(String) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderRegistry

getCoderNames() - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderRegistry

getComment() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

getCreationStatus() - Method in interface org.aksw.jena_sparql_api.io.endpoint.Destination

Get a description of the creation status.

getCreationStatus() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

getCreationStatus() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromByteSource

getCreationStatus() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

getCreationStatus() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

getCreationStatus() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

getDataset() - Method in class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

getDestination() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

getEffectiveSource() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

getEndPos() - Method in interface org.aksw.jena_sparql_api.io.binseach.PageManager

getEndPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForByteBuffer

getEndPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

getEndPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

getFileBeingCreated() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

The file being created once there is a subscription to the single

getFileCreation() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

getFilter() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

getGraphName() - Method in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

getGraphNameAndNodes() - Method in class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

getHealthCheckInterval() - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

getId() - Method in interface org.aksw.jena_sparql_api.io.binseach.Page

getId() - Method in class org.aksw.jena_sparql_api.io.binseach.PageBase

getIndexForPos(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getInput() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterBuilder

getInputStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

getInputStream() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.ProcessSink

getInputStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

getIsDone() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

getMaxPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getMinPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getNextPosFor(byte) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Returns the position of the next delimiter or the end of the stream

getNode() - Method in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

getOffset() - Method in interface org.aksw.jena_sparql_api.io.binseach.Block

Offset in a parent container; should be 0 if there is none

getOffset() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

getOutput() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterBuilder

getOutputSink() - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

getOutputSink() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

getOutputStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

getPageForPos(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getPageManager() - Method in interface org.aksw.jena_sparql_api.io.binseach.Page

getPageManager() - Method in class org.aksw.jena_sparql_api.io.binseach.PageBase

getPageSize() - Method in interface org.aksw.jena_sparql_api.io.binseach.PageManager

The pageSize.

getPageSize() - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForByteBuffer

getPageSize() - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

getPageSize() - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

getPath() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

getPath() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

getPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

getPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

getPointer(byte[][], BufferFromInputStream.BucketPointer, long) - Static method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

getPos() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

getPos() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getPos() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Optional operation.

getPos() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

getPosition(byte[][], int, int) - Static method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

getPosOfFirstMatch(Seekable, byte, byte[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

The initial position is assumed point to the delimiter The result will point to the initial position or a preceding delimiter If there is no preceding delimiter, the seekable will be positioned before start

getPrevPosFor(byte) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getProcessBuilder() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

Return the underlying processBuilder

getRefForPage(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

getRelMaxIndex(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getRelMinIndex(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

getSimilarityRemover() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

getSize() - Method in interface org.aksw.jena_sparql_api.io.binseach.ByteBufferSupplier

getSizeOfBlock(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.BlockSource

getSizeOfBlock(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

getSizeOfBlock(long) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

getSubjectCache() - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

goodSuffixTable - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

goodSuffixTable - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

graphBaseFind(Triple) - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromPrefixMatcher

graphBaseFind(Triple) - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

graphBaseFindCore(Triple) - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromPrefixMatcher

GraphFromPrefixMatcher - Class in org.aksw.jena_sparql_api.io.binseach

TODO Check whether Graph is the appropriate abstraction

GraphFromPrefixMatcher(BinarySearcher) - Constructor for class org.aksw.jena_sparql_api.io.binseach.GraphFromPrefixMatcher

GraphFromSubjectCache - Class in org.aksw.jena_sparql_api.io.binseach

GraphFromSubjectCache(Graph) - Constructor for class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

GraphFromSubjectCache(Graph, Cache<Node, Graph>) - Constructor for class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

graphName - Variable in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

GraphNameAndNode - Class in org.aksw.jena_sparql_api.io.json

GraphNameAndNode(String, Node) - Constructor for class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

graphNameAndNodes - Variable in class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

GroupedResourceInDataset - Class in org.aksw.jena_sparql_api.io.json

GroupedResourceInDataset(Dataset) - Constructor for class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

GroupedResourceInDataset(Dataset, Set<GraphNameAndNode>) - Constructor for class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

H

hasBlockAfter(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.BlockSource

hasBlockAfter(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

hasBlockAfter(long) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

hasBlockBefore(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.BlockSource

hasBlockBefore(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

hasBlockBefore(long) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

hashCode() - Method in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

hasNext() - Method in interface org.aksw.jena_sparql_api.io.binseach.Block

Check if there is a subsequent block.

hasNext() - Method in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

hasNext() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

hasPrev() - Method in interface org.aksw.jena_sparql_api.io.binseach.Block

hasPrev() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

healthCheckInterval - Variable in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

HotFile - Interface in org.aksw.jena_sparql_api.io.endpoint

A hot file is a currently running file creation to by another thread or process.

HotFileFromJava - Class in org.aksw.jena_sparql_api.io.endpoint

HotFileFromJava(ConcurrentFileEndpoint, AutoCloseable) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

HotFileFromProcess - Class in org.aksw.jena_sparql_api.io.filter.sys

HotFileFromProcess(Path, Single<Integer>) - Constructor for class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

I

id - Variable in class org.aksw.jena_sparql_api.io.binseach.PageBase

ifNeedsFileInput(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

ifNeedsFileInput(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

Same as execStream() as this execution engine will never ask for the creation of temporary files

ifNeedsFileInput(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

ifNeedsFileOutput(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

ifNeedsFileOutput(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

ifNeedsFileOutput(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

index - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Index is relative to the the page's buffer.position()

indexOf(byte[], byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

Returns the index within this string of the first occurrence of the specified substring.

init() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

init(Path, Single<Integer>) - Method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

InputSplits - Class in org.aksw.jena_sparql_api.io.split

InputSplits() - Constructor for class org.aksw.jena_sparql_api.io.split.InputSplits

inputStream - Variable in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

InputStreamOrPath - Class in org.aksw.jena_sparql_api.io.pipe.process

Object that holds either an input stream or a path.

InputStreamOrPath(Path) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

InputStreamOrPath(InputStream) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

InputStreamSource - Interface in org.aksw.jena_sparql_api.io.endpoint

inputStreamSource - Variable in class org.aksw.jena_sparql_api.io.endpoint.InputStreamSupplierBasic

InputStreamSupplier - Interface in org.aksw.jena_sparql_api.io.endpoint

An InputStreamSupplier is a source for InputStreams Obtaining an instance from the supplier should be near instant.

InputStreamSupplierBasic - Class in org.aksw.jena_sparql_api.io.endpoint

InputStreamSupplierBasic(InputStreamSource) - Constructor for class org.aksw.jena_sparql_api.io.endpoint.InputStreamSupplierBasic

INSTANCE - Static variable in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderRegistry

IoTransform - Class in org.aksw.jena_sparql_api.io.filter.sys

IoTransform() - Constructor for class org.aksw.jena_sparql_api.io.filter.sys.IoTransform

isAbandoned - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

isAbandoned() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

isAborted() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

isAlive() - Method in interface org.aksw.jena_sparql_api.io.common.Reference

A reference may itself be released, but references to it may keep it alive

isAlive() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

isClosed() - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

isClosed() - Method in interface org.aksw.jena_sparql_api.io.common.Reference

Check whether this reference is closed / released

isClosed() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

isComplete() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

isDataSupplierConsumed - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

Flag to indicate that the dataSupplier has been consumed This is the case when dataSupplier(buffer) returns -1

isDone - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

isForward() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherDelegate

isForward() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

isForward() - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

isForward() - Method in interface org.aksw.jena_sparql_api.io.deprecated.SeekableMatcher

Whether the matcher matches in forward direction and thus nextPos() moves towards the end of the match.

isFwd - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

isFwd - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

isFwd - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

isFwd - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

isOpen() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

isOpen - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

isOpen() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

isOpen() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

isOpen - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

isOpen() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

isOpen() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

isOpen() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

isOpen() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

isOutputStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

isPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

isPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

isPosAfterEnd() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

isPosAfterEnd() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

isPosAfterEnd() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

The state of a seekable may be one unit beyond the end.

isPosAfterEnd() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

isPosBeforeStart() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

isPosBeforeStart() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

isPosBeforeStart() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

The state of a seekable may be one unit before the start.

isPosBeforeStart() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

isPrefix(byte[], int) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

Is needle[p:end] a prefix of needle?

isReleased - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

isService - Variable in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

isService() - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

isStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

isTooSimilar - Variable in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

isUnderlyingEntityKnownToBeClosed() - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

isValid() - Method in interface org.aksw.jena_sparql_api.io.common.ResourceHolder

A resource holder is valid as long as it was not closed.

isValid() - Method in class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

itemDelegate - Variable in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

K

KEY_GRAPH - Static variable in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

KEY_NODE - Static variable in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

knownDataSize - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

The number of cached bytes.

L

length - Variable in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

length() - Method in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

length() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

length - Variable in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

length() - Method in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

length() - Method in interface org.aksw.jena_sparql_api.io.binseach.Segment

Retrieve the length of the segment For segments that are based on encoded data this method may trigger a full read

limitNext(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Limit the

limitPrev(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Limit the

loadBlock(Seekable) - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

loadData(int) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

fetch a chunk from the input stream

loadDataUpTo(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

loadGraph(Node) - Method in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

loadNextBlock() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

lowerCaseMode - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

M

magicStr - Static variable in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

main(String[]) - Static method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderGzip

main(String[]) - Static method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderLbZip

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.GraphFromPrefixMatcher

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.json.TypeAdapterNode

main(String[]) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

TODO Convert to test cases

mainBoyerMooreTest(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

mainBz2Decode(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

mainBz2DecodeNice(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

mainOld(String[]) - Static method in class org.aksw.jena_sparql_api.io.filter.sys.IoTransform

MainPlaygroundScanFile - Class in org.aksw.jena_sparql_api.io.binseach

MainPlaygroundScanFile() - Constructor for class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

mainWc(String[]) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

makeByteTableOld(byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

Makes the jump table based on the mismatched character information.

makeOffsetTableFromC(byte[]) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

Makes the jump table based on the scan offset which mismatch occurs.

mapPathToPath() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PipeTransform

mapPathToPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCall

mapPathToPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

mapPathToPath(BiFunction<Path, Path, String[]>) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngine

mapPathToPath(BiFunction<Path, Path, String[]>) - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngineNative

mapPathToPath(BiFunction<Path, Path, String[]>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

mapPathToStream() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PipeTransform

mapPathToStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

mapPathToStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCall

mapPathToStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

mapPathToStream(Function<Path, String[]>) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngine

mapPathToStream(Function<Path, String[]>) - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngineNative

mapPathToStream(Function<Path, String[]>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

mapStreamToPath() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PipeTransform

mapStreamToPath(Path) - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

mapStreamToPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCall

mapStreamToPath() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

mapStreamToPath(Function<Path, String[]>) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngine

mapStreamToPath(Function<Path, String[]>) - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngineNative

mapStreamToPath(Function<Path, String[]>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

mapStreamToStream() - Method in interface org.aksw.jena_sparql_api.io.pipe.process.PipeTransform

mapStreamToStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

mapStreamToStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCall

mapStreamToStream() - Method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

mapStreamToStream(String[]) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngine

mapStreamToStream(String[]) - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngineNative

mapStreamToStream(String[]) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

MatcherFactory - Interface in org.aksw.jena_sparql_api.io.deprecated

MatcherFactoryForBytes - Class in org.aksw.jena_sparql_api.io.deprecated

MatcherFactoryForBytes() - Constructor for class org.aksw.jena_sparql_api.io.deprecated.MatcherFactoryForBytes

materialize(Supplier<Path>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.Destination

Materialize the destination to a given file.

materialize(Supplier<Path>) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

materialize(Supplier<Path>) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromByteSource

materialize(Supplier<Path>) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

materialize(Supplier<Path>) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

materialize(Supplier<Path>) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

maxIndex - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

maxPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

maxPos - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

maxPos - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

maxReadSize - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

Maximum number to read from the dataSupplier in one request

maxReadSize - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

minIndex - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

minPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

minPos - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

minPos - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

minReadSize - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

monitor(Object, CompletableFuture<?>) - Static method in class org.aksw.jena_sparql_api.io.filter.sys.IoTransform

Monitor status of an object until a completable future completes

N

newBuffer() - Method in interface org.aksw.jena_sparql_api.io.binseach.Page

Return a byte buffer for the page with freshly initialized positioning i.e.

newBuffer() - Method in class org.aksw.jena_sparql_api.io.binseach.PageBase

newChannel() - Method in interface org.aksw.jena_sparql_api.io.api.ChannelFactory

newChannel() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

newChannel() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

newInputStream(Seekable, BinSearchScanState) - Static method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

newInputStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileWritingProcess

Attempt to establish an input stream while the data is being written New input streams will refer to the current target file of the write process.

newInputStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.HotFile

Open a new stream to the hot file The input stream delivery may be delayed until after the file creation is complete.

newInputStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

newInputStream() - Method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

newMatcher() - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

newMatcher() - Method in interface org.aksw.jena_sparql_api.io.deprecated.MatcherFactory

newReadChannel() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

nextBlock() - Method in interface org.aksw.jena_sparql_api.io.binseach.Block

The block source of this block - if any.

nextBlock() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

nextBucketSize() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream

nextKnownDelimPos - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

nextKnownDelimPos(Seekable, byte, long, BinSearchScanState) - Static method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

nextPos(int) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Attempts to advance the position by delta bytes and returns true if this succeeded.

nextPos(int) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Attempt to advance the position by the given number of bytes.

nextPos(Seekable, int) - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

node - Variable in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

nodeToStr(Node) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

numSkippedItems - Variable in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

O

obtainPathFrom(Supplier<Path>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileConverterConfig

offset - Variable in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

offset - Variable in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

OmitSimilarItems<T> - Class in org.aksw.jena_sparql_api.io.utils

OmitSimilarItems(Consumer<? super T>, Consumer<Long>, BiPredicate<? super T, ? super T>) - Constructor for class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

on(Object, Supplier<Boolean>, AutoCloseable) - Static method in class org.aksw.jena_sparql_api.concurrent.util.Synchronized

Helper that checks the condition before a synchronized block and once it is entered.

openInputStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.InputStreamSource

org.aksw.jena_sparql_api.concurrent.util - package org.aksw.jena_sparql_api.concurrent.util

org.aksw.jena_sparql_api.conjure.entity.utils - package org.aksw.jena_sparql_api.conjure.entity.utils

org.aksw.jena_sparql_api.io.api - package org.aksw.jena_sparql_api.io.api

org.aksw.jena_sparql_api.io.binseach - package org.aksw.jena_sparql_api.io.binseach

org.aksw.jena_sparql_api.io.binseach.bz2 - package org.aksw.jena_sparql_api.io.binseach.bz2

org.aksw.jena_sparql_api.io.common - package org.aksw.jena_sparql_api.io.common

org.aksw.jena_sparql_api.io.deprecated - package org.aksw.jena_sparql_api.io.deprecated

org.aksw.jena_sparql_api.io.endpoint - package org.aksw.jena_sparql_api.io.endpoint

org.aksw.jena_sparql_api.io.filter - package org.aksw.jena_sparql_api.io.filter

org.aksw.jena_sparql_api.io.filter.sys - package org.aksw.jena_sparql_api.io.filter.sys

org.aksw.jena_sparql_api.io.json - package org.aksw.jena_sparql_api.io.json

org.aksw.jena_sparql_api.io.lib - package org.aksw.jena_sparql_api.io.lib

org.aksw.jena_sparql_api.io.pipe.process - package org.aksw.jena_sparql_api.io.pipe.process

org.aksw.jena_sparql_api.io.split - package org.aksw.jena_sparql_api.io.split

org.aksw.jena_sparql_api.io.utils - package org.aksw.jena_sparql_api.io.utils

originalBuffer - Variable in class org.aksw.jena_sparql_api.io.binseach.PageBase

outputSink - Variable in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

outputSink - Variable in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

OutputStream - Variable in class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

OutputStreamOrPath - Class in org.aksw.jena_sparql_api.io.pipe.process

Object that holds either an output stream or a path.

OutputStreamOrPath(Path) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

OutputStreamOrPath(OutputStream) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

outputToFile(Path) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

If explicit output to a file is requested, the handler set via ifNeedsFileOutput will not be called.

outputToFile(Path) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

outputToFile(Path) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

outputToStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

If the execution requires the generation of an intermediate file, the handler for ifNeedsFileOutput should be called

outputToStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

outputToStream() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

P

Page - Interface in org.aksw.jena_sparql_api.io.binseach

A page is a fixed size sequence of bytes obtained from a page manager backed by a ByteBuffer.

page - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Current page

PageBase - Class in org.aksw.jena_sparql_api.io.binseach

PageBase(PageManager, long, ByteBuffer) - Constructor for class org.aksw.jena_sparql_api.io.binseach.PageBase

pageBuffer - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

pageCache - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

The cache is crucial to the implementation.

pageForBuf - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerForByteBuffer

pageManager - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

pageManager - Variable in class org.aksw.jena_sparql_api.io.binseach.PageBase

PageManager - Interface in org.aksw.jena_sparql_api.io.binseach

pageManager - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

pageManager - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableSourceFromPageManager

PageManagerForByteBuffer - Class in org.aksw.jena_sparql_api.io.binseach

PageManager wrapper for a static buffer

PageManagerForByteBuffer(ByteBuffer) - Constructor for class org.aksw.jena_sparql_api.io.binseach.PageManagerForByteBuffer

PageManagerForFileChannel - Class in org.aksw.jena_sparql_api.io.binseach

PageManagerForFileChannel(FileChannel, long, int) - Constructor for class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

PageManagerWrapper - Class in org.aksw.jena_sparql_api.io.binseach

A wrapper that virtually puts a displaced page view over a delegate There must be a 1:1 correspondence between page and byte buffer.

PageManagerWrapper(PageManager, long, int) - Constructor for class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

PageNavigator - Class in org.aksw.jena_sparql_api.io.binseach

An object for (predominantly relative) positioning over a sequence of fixed size pages

PageNavigator(PageManager) - Constructor for class org.aksw.jena_sparql_api.io.binseach.PageNavigator

PageNavigator(PageManager, long, long) - Constructor for class org.aksw.jena_sparql_api.io.binseach.PageNavigator

pageObj - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

pageSize - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

pageSize - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

parent - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

pat - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

pat - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcherFactory

path - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

path - Variable in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

path - Variable in class org.aksw.jena_sparql_api.io.filter.sys.FileCreationWrapper

path - Variable in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

path - Variable in class org.aksw.jena_sparql_api.io.pipe.process.InputStreamOrPath

path - Variable in class org.aksw.jena_sparql_api.io.pipe.process.OutputStreamOrPath

PathCoder - Interface in org.aksw.jena_sparql_api.conjure.entity.utils

Interface for converting source files to target files.

PathCoderGzip - Class in org.aksw.jena_sparql_api.conjure.entity.utils

PathCoderGzip() - Constructor for class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderGzip

PathCoderLbZip - Class in org.aksw.jena_sparql_api.conjure.entity.utils

PathCoderLbZip() - Constructor for class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderLbZip

PathCoderNativBzip - Class in org.aksw.jena_sparql_api.conjure.entity.utils

PathCoderNativBzip() - Constructor for class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderNativBzip

PathCoderRegistry - Class in org.aksw.jena_sparql_api.conjure.entity.utils

PathCoderRegistry() - Constructor for class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderRegistry

PathCoderSysBase - Class in org.aksw.jena_sparql_api.conjure.entity.utils

PathCoderSysBase() - Constructor for class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

PathToStream - Interface in org.aksw.jena_sparql_api.io.pipe.process

peekNextBytes(byte[], int, int) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Reads bytes at the current position; does not advance pos

peekNextBytes(byte[], int, int) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Attempt to read bytes at the current position without altering the position

performHealthCheck() - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

Perform a health check on the service.

pipeInto(FilterEngine) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

pipeInto(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

pipeInto(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

pipeSpec - Variable in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCall

PipeTransform - Interface in org.aksw.jena_sparql_api.io.pipe.process

pipeTransform - Variable in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

PipeTransformChain - Interface in org.aksw.jena_sparql_api.io.pipe.process

PipeTransformRx - Class in org.aksw.jena_sparql_api.io.pipe.process

RxWrapper for pipe transforms

PipeTransformRx(PipeTransform) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

PipeTransformSysCall - Class in org.aksw.jena_sparql_api.io.pipe.process

PipeTransformSysCall(SysCallPipeSpec) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCall

PipeTransformSysCallStream - Class in org.aksw.jena_sparql_api.io.pipe.process

Implementation of a pipe transform that pipes all arguments to a streaming syscall

PipeTransformSysCallStream(String[]) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

PipeTransformSysCallStream(String[], ProcessPipeEngine) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformSysCallStream

pointer - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

POISON - Static variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

pollIntervalInMs - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

pos - Variable in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

position(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

Setting a position outside of the size of the entity is valid will will cause a read to immediately return an EOF See ReadableByteChannel

position() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

posToEnd() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

posToEnd() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

posToEnd() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Optional operation.

posToEnd() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

posToNext(byte) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Advances the position to the next matching delimiter or one byte past the end of the stream.

posToNext(byte) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Move the position to the next delimiter if it exists.

posToNext(byte, boolean) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

0: match but 0 bytes moved negative values indicate no match.

posToNext(byte, boolean) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

positive: relative position issue: 0 means no position change, but it does not tell whether the current position is a match or not we could return a pair with +0 with current position matches and -0 current position does not match but no further bytes are available

posToPrev(byte) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

posToPrev(byte) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Move the position to the previous delimiter if it exists, or one element past the end of data such that isPosBeforeStart() yields true.

posToStart() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

posToStart() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

posToStart() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Optional operation.

posToStart() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

postStart - Variable in class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

prepareProcessBuilder() - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

Expected to return a properly configured ProcessBuilder instance, such as having the path to the executable and the arguments set.

prepareStream() - Method in interface org.aksw.jena_sparql_api.io.endpoint.Destination

This method requests a supplier for inputstreams.

prepareStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

prepareStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromByteSource

prepareStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

prepareStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

prepareStream() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

prevBlock() - Method in interface org.aksw.jena_sparql_api.io.binseach.Block

prevBlock() - Method in class org.aksw.jena_sparql_api.io.binseach.DecodedDataBlock

prevPos(int) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

prevPos(int) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

prevPos(int) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Attempt to step back the position by the given number of bytes.

prevPos(Seekable, int) - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

printLines(InputStream, int) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

PROBE_PATH - Static variable in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

process - Variable in class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

process - Variable in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

processBuilder - Variable in class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

processBuilder - Variable in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

processor - Variable in class org.aksw.jena_sparql_api.io.endpoint.FilterEngineJava

processor - Variable in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

ProcessPipeEngine - Interface in org.aksw.jena_sparql_api.io.pipe.process

Interface to perform process execution.

ProcessPipeEngineNative - Class in org.aksw.jena_sparql_api.io.pipe.process

ProcessPipeEngineNative() - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeEngineNative

ProcessPipeUtils - Class in org.aksw.jena_sparql_api.io.pipe.process

Utility functions to create file and input stream transform based on system calls InputStreams passed as arguments to the various processors are considered to be owned by the processors.

ProcessPipeUtils() - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

ProcessSink - Interface in org.aksw.jena_sparql_api.io.pipe.process

ProcessSinkImpl - Class in org.aksw.jena_sparql_api.io.pipe.process

A helper class to obtain process output as file or a stream

ProcessSinkImpl(ProcessBuilder, Consumer<? super Process>) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

put(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

R

RDFNodeJsonUtils - Class in org.aksw.jena_sparql_api.io.json

Blank node preserving JSON serialization of RDFnode instances i.e.

RDFNodeJsonUtils() - Constructor for class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

read(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

read(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

read(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

read(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

read(ByteBuffer) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

read(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

read(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

Read method that blocks if no data is available but the write channel is still open

read(JsonReader) - Method in class org.aksw.jena_sparql_api.io.json.TypeAdapterDataset

read(JsonReader) - Method in class org.aksw.jena_sparql_api.io.json.TypeAdapterNode

ReadableByteChannelBase - Class in org.aksw.jena_sparql_api.io.binseach

ReadableByteChannelBase() - Constructor for class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

ReadableByteChannelForLinesMatchingPrefix - Class in org.aksw.jena_sparql_api.io.binseach

ReadableByteChannelForLinesMatchingPrefix(Seekable, BinSearchScanState) - Constructor for class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

ReadableByteChannelFromBlockingQueue - Class in org.aksw.jena_sparql_api.io.binseach

ReadableByteChannelFromBlockingQueue() - Constructor for class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

ReadableByteChannelFromBlockingQueue(Runnable) - Constructor for class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelFromBlockingQueue

readActual(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

readActual(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelBase

readBroken(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

readLine() - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

readRemaining(ByteBuffer, ByteBuffer) - Static method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

readString(int) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

readString(int) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

readString(int) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

readString(int) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

recentlySkippedItem - Variable in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

redirectTo(Path) - Method in interface org.aksw.jena_sparql_api.io.pipe.process.ProcessSink

redirectTo(Path) - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

Reference<T> - Interface in org.aksw.jena_sparql_api.io.common

Interface for nested references.

referenceChannel - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileReader

ReferenceImpl<T> - Class in org.aksw.jena_sparql_api.io.common

Implementation of a Reference TODO Avoid needless synchronization; a ConcurrentHashMap may help; ref.equals could do only reference comparison

ReferenceImpl(ReferenceImpl<T>, T, AutoCloseable, Object) - Constructor for class org.aksw.jena_sparql_api.io.common.ReferenceImpl

release(Object) - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

releaseAction - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

The release action differs for references: On the root reference, the releaseAction releases the wrapped resource On a child reference, the releaseAction releases itself from the parent

relMaxIndexInPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

relMinIndexInPage - Variable in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

requestBufferForPage(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.PageManager

requestBufferForPage(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForByteBuffer

requestBufferForPage(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerForFileChannel

requestBufferForPage(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

requestSeekableFor(PageManager, long) - Static method in class org.aksw.jena_sparql_api.io.binseach.Seekables

requiresFileInput() - Method in interface org.aksw.jena_sparql_api.io.filter.sys.FilterMetadata

requiresFileOutput() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterConfig

Method yields true if the filter needs to create an intermediary output file

requiresFileOutput() - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

requiresFileOutput() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

Actually execute the stream and write the result to a file

requiresFileOutput() - Method in interface org.aksw.jena_sparql_api.io.filter.sys.FilterMetadata

resetState() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherDelegate

resetState() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

resetState() - Method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

resetState() - Method in interface org.aksw.jena_sparql_api.io.deprecated.SeekableMatcher

Reset the state of the matcher such that it can be used with a fresh seekable

ResourceHolder<T> - Interface in org.aksw.jena_sparql_api.io.common

ResourceHolderImpl<T> - Class in org.aksw.jena_sparql_api.io.common

Associate a resource with a closing mechanism

ResourceHolderImpl(T, AutoCloseable) - Constructor for class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

resultFuture - Variable in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

returningFromMatch - Variable in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreMatcher

ReverseCharSequenceFromSeekable - Class in org.aksw.jena_sparql_api.io.binseach

ReverseCharSequenceFromSeekable(Seekable) - Constructor for class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

ReverseCharSequenceFromSeekable(Seekable, int, int) - Constructor for class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

run(Path, Path, Function<Path, String[]>) - Method in class org.aksw.jena_sparql_api.conjure.entity.utils.PathCoderSysBase

run(Process, FlowableEmitter<Integer>) - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

Wraps process execution as a single that will hold the exit code.

S

search(byte[]) - Method in interface org.aksw.jena_sparql_api.io.binseach.BinarySearcher

search(String) - Method in interface org.aksw.jena_sparql_api.io.binseach.BinarySearcher

search(byte[]) - Method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnBlockSource

search(String) - Method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

The high-level search method.

search(byte[]) - Method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

searchCore(String) - Method in class org.aksw.jena_sparql_api.io.binseach.BinarySearchOnSortedFile

seekable - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

seekable - Variable in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

seekable - Variable in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

Seekable - Interface in org.aksw.jena_sparql_api.io.binseach

Interface that enables relative navigation over data of fixed finite but possibly initially unknown size.

SeekableFromBlock - Class in org.aksw.jena_sparql_api.io.binseach

Segment could have predecessor / successor methods, but how can we slice segments we request? The use case is to scan backward until a condition is no longer satisfied, maybe we don't need slicing then

SeekableFromBlock(Reference<Block>, int, long) - Constructor for class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

SeekableFromBlock(Reference<Block>, int, long, long, long) - Constructor for class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

SeekableMatcher - Interface in org.aksw.jena_sparql_api.io.deprecated

A matcher over a Seekable.

SeekableMatcherDelegate - Class in org.aksw.jena_sparql_api.io.binseach

SeekableMatcherDelegate(SeekableMatcher) - Constructor for class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherDelegate

SeekableMatcherForByte - Class in org.aksw.jena_sparql_api.io.binseach

SeekableMatcherForByte(byte, boolean, boolean) - Constructor for class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

Seekables - Class in org.aksw.jena_sparql_api.io.binseach

Seekables() - Constructor for class org.aksw.jena_sparql_api.io.binseach.Seekables

seekableSource - Variable in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

SeekableSource - Interface in org.aksw.jena_sparql_api.io.binseach

SeekableSourceFromPageManager - Class in org.aksw.jena_sparql_api.io.binseach

SeekableSourceFromPageManager(PageManager) - Constructor for class org.aksw.jena_sparql_api.io.binseach.SeekableSourceFromPageManager

Segment - Interface in org.aksw.jena_sparql_api.io.binseach

A segment is a sequence of bytes with a fixed size.

setHealthCheckInterval(Duration) - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

setInputFileCreationHandler(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterBuilder

setOutputFileCreationHandler(Supplier<Path>, BiConsumer<Path, FileWritingProcess>) - Method in interface org.aksw.jena_sparql_api.io.endpoint.FilterBuilder

setOutputSink(Consumer<String>) - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

setOutputSink(Consumer<String>) - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

setPos(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

setPos(long, int) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

setPos(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

setPos(long) - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

Optional operation.

setPos(long) - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

setService(boolean) - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

If the process is a service, its output will be processed by a separate thread.

setSimilarityRemover(UnaryOperator<Consumer<String>>) - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

shutDown() - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

shutdownHookThread - Variable in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

similarityRemover - Variable in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

SimpleProcessExecutor - Class in org.aksw.jena_sparql_api.io.utils

SimpleProcessExecutor(ProcessBuilder) - Constructor for class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

singleFromCompletableFuture(Supplier<T>, Function<? super T, ? extends CompletableFuture<V>>, ThrowingConsumer<? super T>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

singleFromFileCreation(Supplier<FileCreation>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.PipeTransformRx

If the file creation completed successfully, further subscriptions to the single should return the cached path to the file instead of starting the creation again

size() - Method in interface org.aksw.jena_sparql_api.io.binseach.BlockSource

size() - Method in class org.aksw.jena_sparql_api.io.binseach.BlockSourceFromPageManager

size() - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

size() - Method in class org.aksw.jena_sparql_api.io.binseach.bz2.BlockSourceBzip2

size() - Method in interface org.aksw.jena_sparql_api.io.binseach.Seekable

size() - Method in interface org.aksw.jena_sparql_api.io.binseach.SeekableSource

size() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableSourceFromPageManager

skipCountDelegate - Variable in class org.aksw.jena_sparql_api.io.utils.OmitSimilarItems

skipFirstClose - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

source - Variable in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

source - Variable in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

SpecialGraphs - Class in org.aksw.jena_sparql_api.io.lib

SpecialGraphs() - Constructor for class org.aksw.jena_sparql_api.io.lib.SpecialGraphs

specs - Variable in class org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeBuilder

startBlockRef - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

startPosInStartSegment - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableFromBlock

startProcess(ProcessBuilder) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

startProcess() - Method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessSinkImpl

startThreadedCopy(InputStream, OutputStream, Consumer<Exception>) - Static method in class org.aksw.jena_sparql_api.io.pipe.process.ProcessPipeUtils

Create a new thread to copy from source to target TODO Closing the target silently terminate the thread and associated resources (such as a system process) Closing the input stream should not happen though as it is considered to be owned by the copy process

startUp() - Method in class org.aksw.jena_sparql_api.io.utils.AbstractSystemService

Starts the service and yields a future indicating whether it became healthy within a certain time limit.

state - Variable in class org.aksw.jena_sparql_api.io.binseach.ReadableByteChannelForLinesMatchingPrefix

staticBuffer - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerForByteBuffer

StreamDestination - Interface in org.aksw.jena_sparql_api.io.endpoint

StreamToStream - Interface in org.aksw.jena_sparql_api.io.pipe.process

strToNode(String) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

subjectCache - Variable in class org.aksw.jena_sparql_api.io.binseach.GraphFromSubjectCache

subSequence(int, int) - Method in class org.aksw.jena_sparql_api.io.binseach.CharSequenceFromSeekable

subSequence(int, int) - Method in class org.aksw.jena_sparql_api.io.binseach.ReverseCharSequenceFromSeekable

suffixLength(byte[], int) - Static method in class org.aksw.jena_sparql_api.io.deprecated.BoyerMooreByteFromWikipedia

Returns the maximum length of the substring ends at p and is a suffix.

supportsAbsolutePosition() - Method in interface org.aksw.jena_sparql_api.io.binseach.SeekableSource

True if Seekables obtained by the source support absolution positions

supportsAbsolutePosition() - Method in class org.aksw.jena_sparql_api.io.binseach.SeekableSourceFromPageManager

supportsConcurrentRead() - Method in interface org.aksw.jena_sparql_api.io.endpoint.FileWritingProcess

Synchronized - Class in org.aksw.jena_sparql_api.concurrent.util

Synchronized() - Constructor for class org.aksw.jena_sparql_api.concurrent.util.Synchronized

SysCallFn - Interface in org.aksw.jena_sparql_api.io.filter.sys

Generator for system commands that realize filters

SysCallPipeBuilder - Class in org.aksw.jena_sparql_api.io.pipe.process

SysCallPipeBuilder(List<SysCallPipeSpec>) - Constructor for class org.aksw.jena_sparql_api.io.pipe.process.SysCallPipeBuilder

SysCallPipeSpec - Interface in org.aksw.jena_sparql_api.io.pipe.process

This is just the plain command construction - it does not involve operator metadata whether e.g.

T

ThrowingConsumer<T> - Interface in org.aksw.jena_sparql_api.io.filter.sys

toDataset(String) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toDataset(Dataset, String) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toJsonNodeObject(RDFNode, Gson) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toJsonNodeString(RDFNode, Gson) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toJsonObject(Model, Gson) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toJsonObject(Dataset, Gson) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toLower - Variable in class org.aksw.jena_sparql_api.io.binseach.SeekableMatcherForByte

toModel(String) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toModel(Model, String) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toRDFNode(String, Gson) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toRDFNode(JsonObject) - Static method in class org.aksw.jena_sparql_api.io.json.RDFNodeJsonUtils

toString() - Method in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

toString() - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

toString() - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

toString() - Method in class org.aksw.jena_sparql_api.io.endpoint.FilterExecutionJava

toString() - Method in class org.aksw.jena_sparql_api.io.endpoint.HotFileFromJava

toString() - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

toString() - Method in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

toString() - Method in class org.aksw.jena_sparql_api.io.json.GraphNameAndNode

toString() - Method in class org.aksw.jena_sparql_api.io.json.GroupedResourceInDataset

transferTo(FilterEngine) - Method in interface org.aksw.jena_sparql_api.io.endpoint.Destination

transferTo(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFilter

transferTo(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromByteSource

transferTo(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFile

transferTo(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromFileCreation

transferTo(FilterEngine) - Method in class org.aksw.jena_sparql_api.io.endpoint.DestinationFromSwitch

truncate(long) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

tryGetFileCreation(Destination) - Method in class org.aksw.jena_sparql_api.io.filter.sys.FilterExecutionFromSysFunction

TypeAdapterDataset - Class in org.aksw.jena_sparql_api.io.json

TypeAdapterDataset() - Constructor for class org.aksw.jena_sparql_api.io.json.TypeAdapterDataset

TypeAdapterDataset(Supplier<Dataset>) - Constructor for class org.aksw.jena_sparql_api.io.json.TypeAdapterDataset

TypeAdapterNode - Class in org.aksw.jena_sparql_api.io.json

TypeAdapterNode() - Constructor for class org.aksw.jena_sparql_api.io.json.TypeAdapterNode

U

updateRelCache(long) - Method in class org.aksw.jena_sparql_api.io.binseach.PageNavigator

Update relative min and max index for the given page, taking one byte before and after the selected range into account

V

value - Variable in class org.aksw.jena_sparql_api.io.common.ReferenceImpl

value - Variable in class org.aksw.jena_sparql_api.io.common.ResourceHolderImpl

virtPageSize - Variable in class org.aksw.jena_sparql_api.io.binseach.PageManagerWrapper

W

watchProcessOutput(Process) - Method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

Utility function that blocks until the process the ends, thereby forwarding output to the configured sink and applying filtering of consecutive lines that are too similar

wcBwd(PageNavigator) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

Return the line count and whether the first position was a newline

wcFwd(PageNavigator) - Static method in class org.aksw.jena_sparql_api.io.binseach.MainPlaygroundScanFile

Count the number of occurrences of '\n' together with a flag whether it ocurred at the end

wrap(InputStreamSource) - Static method in class org.aksw.jena_sparql_api.io.endpoint.InputStreamSupplierBasic

wrap(ProcessBuilder) - Static method in class org.aksw.jena_sparql_api.io.utils.SimpleProcessExecutor

write(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.binseach.BufferFromInputStream.ByteArrayChannel

write(ByteBuffer) - Method in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

write(JsonWriter, Dataset) - Method in class org.aksw.jena_sparql_api.io.json.TypeAdapterDataset

write(JsonWriter, Node) - Method in class org.aksw.jena_sparql_api.io.json.TypeAdapterNode

writeChannel - Variable in class org.aksw.jena_sparql_api.io.endpoint.ConcurrentFileEndpoint

writeChannel - Variable in class org.aksw.jena_sparql_api.io.filter.sys.HotFileFromProcess

Y

yieldSelf - Variable in class org.aksw.jena_sparql_api.io.binseach.BlockIterState

A B C D E F G H I K L M N O P R S T U V W Y