org.bdgenomics.adam.cli

ViewArgs

class ViewArgs extends Args4jBase with ParquetArgs with ADAMSaveAnyArgs

Linear Supertypes
ADAMSaveAnyArgs, SaveArgs, ParquetArgs, ParquetRDDArgs, Args4jBase, AnyRef, Any
Ordering
  1. Alphabetic
  2. By inheritance
Inherited
  1. ViewArgs
  2. ADAMSaveAnyArgs
  3. SaveArgs
  4. ParquetArgs
  5. ParquetRDDArgs
  6. Args4jBase
  7. AnyRef
  8. Any
  1. Hide All
  2. Show all
Learn more about member selection
Visibility
  1. Public
  2. All

Instance Constructors

  1. new ViewArgs()

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any
  3. final def ##(): Int

    Definition Classes
    AnyRef → Any
  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any
  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  7. var asSingleFile: Boolean

    Definition Classes
    ViewArgs → ADAMSaveAnyArgs
  8. var blockSize: Int

    Definition Classes
    ParquetArgs → ParquetRDDArgs
  9. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  10. var compressionCodec: CompressionCodecName

    Definition Classes
    ParquetArgs → ParquetRDDArgs
  11. var deferMerging: Boolean

    Definition Classes
    ViewArgs → ADAMSaveAnyArgs
  12. var disableDictionaryEncoding: Boolean

    Definition Classes
    ParquetArgs → ParquetRDDArgs
  13. var doPrintUsage: Boolean

    Definition Classes
    Args4jBase
  14. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  15. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  16. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  17. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  18. def hashCode(): Int

    Definition Classes
    AnyRef → Any
  19. var inputPath: String

  20. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  21. var logLevel: String

    Definition Classes
    ParquetArgs
  22. var matchAllBits: Int

  23. var matchSomeBits: Int

  24. var mismatchAllBits: Int

  25. var mismatchSomeBits: Int

  26. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  27. final def notify(): Unit

    Definition Classes
    AnyRef
  28. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  29. var outputPath: String

    Definition Classes
    ViewArgs → SaveArgs
  30. var outputPathArg: String

  31. var pageSize: Int

    Definition Classes
    ParquetArgs → ParquetRDDArgs
  32. var printCount: Boolean

  33. var printMetrics: Boolean

    Definition Classes
    Args4jBase
  34. var sortFastqOutput: Boolean

    Definition Classes
    ViewArgs → ADAMSaveAnyArgs
  35. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  36. def toString(): String

    Definition Classes
    AnyRef → Any
  37. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  38. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  39. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from ADAMSaveAnyArgs

Inherited from SaveArgs

Inherited from ParquetArgs

Inherited from ParquetRDDArgs

Inherited from Args4jBase

Inherited from AnyRef

Inherited from Any

Ungrouped