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createRecordReader(InputSplit, TaskAttemptContext)
- Method in class org.bdgenomics.adam.io.
InterleavedFastqInputFormat
Creates the new record reader that underlies this input format.
createRecordReader(InputSplit, TaskAttemptContext)
- Method in class org.bdgenomics.adam.io.
SingleFastqInputFormat
Creates the new record reader that underlies this input format.
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InterleavedFastqInputFormat
- Class in
org.bdgenomics.adam.io
This class is a Hadoop reader for "interleaved fastq" -- that is, fastq with paired reads in the same file, interleaved, rather than in two separate files.
InterleavedFastqInputFormat()
- Constructor for class org.bdgenomics.adam.io.
InterleavedFastqInputFormat
isSplitable(JobContext, Path)
- Method in class org.bdgenomics.adam.io.
InterleavedFastqInputFormat
For now, we do not support splittable compression codecs.
isSplitable(JobContext, Path)
- Method in class org.bdgenomics.adam.io.
SingleFastqInputFormat
For now, we do not support splittable compression codecs.
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org.bdgenomics.adam.io
- package org.bdgenomics.adam.io
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SingleFastqInputFormat
- Class in
org.bdgenomics.adam.io
This class is a Hadoop reader for single read fastq.
SingleFastqInputFormat()
- Constructor for class org.bdgenomics.adam.io.
SingleFastqInputFormat
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