Deprecated API

Contents

• Deprecated Methods
• Deprecated Constructors

Deprecated Methods

Method and Description
org.biojava.nbio.core.sequence.compound.NucleotideCompound.getConsituents() replaced with NucleotideCompound.getConstituents() due to typographical error

Deprecated Constructors

Constructor and Description
org.biojava.nbio.core.sequence.transcription.RNAToAminoAcidTranslator(SequenceCreatorInterface<AminoAcidCompound>, CompoundSet<NucleotideCompound>, CompoundSet<Table.Codon>, CompoundSet<AminoAcidCompound>, Table, boolean, boolean, boolean) Retained for backwards compatability, setting RNAToAminoAcidTranslator.stopAtStopCodons to false
org.biojava.nbio.core.sequence.transcription.RNAToAminoAcidTranslator(SequenceCreatorInterface<AminoAcidCompound>, CompoundSet<NucleotideCompound>, CompoundSet<Table.Codon>, CompoundSet<AminoAcidCompound>, Table, boolean, boolean, boolean, boolean)