Package org.biojava.nbio.phosphosite

Class Site

java.lang.Object

org.biojava.nbio.phosphosite.Site

public class Site
extends Object

Created by ap3 on 31/10/2014.

Constructor Summary

Constructors

Constructor	Description
Site()

Method Summary

Modifier and Type	Method	Description
String	getChrLoc()
String	getGeneSymb()
String	getGroup()
String	getModType()
String	getOrganism()
String	getProtein()
String	getResidue()
String	getUniprot()
static List<Site>	parseSites(File f)
void	setChrLoc(String chrLoc)
void	setGeneSymb(String geneSymb)
void	setGroup(String group)
void	setModType(String modType)
void	setOrganism(String organism)
void	setProtein(String protein)
void	setResidue(String residue)
void	setUniprot(String uniprot)
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

Site

public Site()

Method Detail

parseSites

public static List<Site> parseSites(File f)
                             throws IOException

Throws:

IOException

getProtein

public String getProtein()

setProtein

public void setProtein(String protein)

getUniprot

public String getUniprot()

setUniprot

public void setUniprot(String uniprot)

getGeneSymb

public String getGeneSymb()

setGeneSymb

public void setGeneSymb(String geneSymb)

getChrLoc

public String getChrLoc()

setChrLoc

public void setChrLoc(String chrLoc)

getModType

public String getModType()

setModType

public void setModType(String modType)

getResidue

public String getResidue()

setResidue

public void setResidue(String residue)

getGroup

public String getGroup()

setGroup

public void setGroup(String group)

getOrganism

public String getOrganism()

setOrganism

public void setOrganism(String organism)

toString

public String toString()

Overrides:

toString in class Object