Uses of Interface
org.biojava.nbio.ontology.utils.Annotation

Packages that use Annotation

Package	Description
org.biojava.nbio.ontology
org.biojava.nbio.ontology.utils

Uses of Annotation in org.biojava.nbio.ontology

Methods in org.biojava.nbio.ontology that return Annotation

Modifier and Type	Method and Description
Annotation	RemoteTerm.Impl.getAnnotation()
Annotation	OntologyTerm.Impl.getAnnotation()
Annotation	Triple.Impl.getAnnotation()
Annotation	Term.Impl.getAnnotation()
Annotation	IntegerOntology.IntTerm.getAnnotation()

Methods in org.biojava.nbio.ontology with parameters of type Annotation

Modifier and Type	Method and Description
void	Term.Impl.setAnnotation(Annotation annotation)

Uses of Annotation in org.biojava.nbio.ontology.utils

Classes in org.biojava.nbio.ontology.utils that implement Annotation

Modifier and Type	Class and Description
class	AbstractAnnotation A utility class to ease the problem of implementing an Annotation to that of providing an apropreate implementation of Map.
class	SmallAnnotation Annotation that is optimized for memory usage.

Fields in org.biojava.nbio.ontology.utils declared as Annotation

Modifier and Type	Field and Description
static Annotation	Annotation.EMPTY_ANNOTATION A really useful empty and immutable annotation object.

Methods in org.biojava.nbio.ontology.utils that return Annotation

Modifier and Type	Method and Description
Annotation	Annotatable.getAnnotation() Should return the associated annotation object.

Constructors in org.biojava.nbio.ontology.utils with parameters of type Annotation

Constructor and Description
AbstractAnnotation(Annotation ann) Copy-constructor.
SmallAnnotation(Annotation ann) Return a new SmallAnnotation that copies all values from another annoation.