Uses of Class
org.biojava.nbio.structure.symmetry.core.QuatSymmetryScores
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Packages that use QuatSymmetryScores Package Description org.biojava.nbio.structure.symmetry.core -
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Uses of QuatSymmetryScores in org.biojava.nbio.structure.symmetry.core
Methods in org.biojava.nbio.structure.symmetry.core that return QuatSymmetryScores Modifier and Type Method Description static QuatSymmetryScoresQuatSuperpositionScorer. calcScores(QuatSymmetrySubunits subunits, javax.vecmath.Matrix4d transformation, List<Integer> permutation)Returns minimum, mean, and maximum RMSD and TM-Score for two superimposed sets of subunits TM score: Yang Zhang and Jeffrey Skolnick, PROTEINS: Structure, Function, and Bioinformatics 57:702–710 (2004)QuatSymmetryScoresHelix. getScores()QuatSymmetryScoresHelixLayers. getScores()Returns QuatSymmetryScores averaged over all rotations (except the first rotation, which is the unit operation E)QuatSymmetryScoresQuatSymmetryResults. getScores()QuatSymmetryScoresRotation. getScores()QuatSymmetryScoresRotationGroup. getScores()Returns QuatSymmetryScores averaged over all rotations (except the first rotation, which is the unit operation E)Methods in org.biojava.nbio.structure.symmetry.core with parameters of type QuatSymmetryScores Modifier and Type Method Description voidHelix. setScores(QuatSymmetryScores scores)voidRotation. setScores(QuatSymmetryScores scores)
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