Uses of Class
org.biojava.nbio.structure.symmetry.core.QuatSymmetryScores
Packages that use QuatSymmetryScores
-
Uses of QuatSymmetryScores in org.biojava.nbio.structure.symmetry.core
Methods in org.biojava.nbio.structure.symmetry.core that return QuatSymmetryScoresModifier and TypeMethodDescriptionstatic QuatSymmetryScoresQuatSuperpositionScorer.calcScores(QuatSymmetrySubunits subunits, javax.vecmath.Matrix4d transformation, List<Integer> permutation) Returns minimum, mean, and maximum RMSD and TM-Score for two superimposed sets of subunits TM score: Yang Zhang and Jeffrey Skolnick, PROTEINS: Structure, Function, and Bioinformatics 57:702–710 (2004)Helix.getScores()HelixLayers.getScores()Returns QuatSymmetryScores averaged over all rotations (except the first rotation, which is the unit operation E)QuatSymmetryResults.getScores()Rotation.getScores()RotationGroup.getScores()Returns QuatSymmetryScores averaged over all rotations (except the first rotation, which is the unit operation E)Methods in org.biojava.nbio.structure.symmetry.core with parameters of type QuatSymmetryScoresModifier and TypeMethodDescriptionvoidHelix.setScores(QuatSymmetryScores scores) voidRotation.setScores(QuatSymmetryScores scores)