Uses of Interface
org.biojava.bio.taxa.TaxonFactory

Packages that use TaxonFactory

Package	Description
org.biojava.bio.seq.io	Classes and interfaces for processing and producing flat-file representations of sequences.
org.biojava.bio.taxa	Taxonomy object for representing species information.

Uses of TaxonFactory in org.biojava.bio.seq.io

Constructors in org.biojava.bio.seq.io with parameters of type TaxonFactory

Constructor	Description
Factory(SequenceBuilderFactory delegateFactory, TaxonFactory taxonFactory, TaxonParser taxonParser, String sciNameKey, String commonNameKey, String ncbiTaxonKey)
OrganismParser(SequenceBuilder delegate, TaxonFactory taxonFactory, TaxonParser taxonParser, String sciNameKey, String commonNameKey, String ncbiTaxonKey)	Deprecated.

Uses of TaxonFactory in org.biojava.bio.taxa

Classes in org.biojava.bio.taxa that implement TaxonFactory

Modifier and Type	Class	Description
class	SimpleTaxonFactory	Deprecated. replaced by classes in org.biojavax.bio.taxa
class	WeakTaxonFactory	Deprecated. replaced by classes in org.biojavax.bio.taxa

Methods in org.biojava.bio.taxa with parameters of type TaxonFactory

Modifier and Type	Method	Description
Taxon	EbiFormat.parse(TaxonFactory taxonFactory, String taxonString)	Deprecated.
Taxon	TaxonParser.parse(TaxonFactory taxonFactory, String taxonString)	Deprecated. Convert a stringified Taxon into a Taxon instance.