| Package | Description |
|---|---|
| org.dishevelled.bio.assembly.gfa1 |
Graphical Fragment Assembly (GFA) 1.0 support.
|
| Modifier and Type | Class and Description |
|---|---|
class |
Containment
Containment GFA 1.0 record.
|
class |
Header
Header GFA 1.0 record.
|
class |
Link
Link GFA 1.0 record.
|
class |
Path
Path GFA 1.0 record.
|
class |
Segment
Segment GFA 1.0 record.
|
class |
Traversal
Traversal.
|
| Modifier and Type | Method and Description |
|---|---|
static Iterable<Gfa1Record> |
Gfa1Reader.read(Readable readable)
Read zero or more GFA 1.0 records from the specified readable.
|
| Modifier and Type | Method and Description |
|---|---|
boolean |
Gfa1Adapter.record(Gfa1Record record) |
boolean |
Gfa1Listener.record(Gfa1Record record)
Notify this GFA 1.0 listener of a GFA 1.0 record.
|
static void |
Gfa1Writer.write(Gfa1Record record,
PrintWriter writer)
Write the specified GFA 1.0 record with the specified print writer.
|
| Modifier and Type | Method and Description |
|---|---|
static void |
Gfa1Writer.write(Iterable<Gfa1Record> records,
PrintWriter writer)
Write zero or more GFA 1.0 records with the specified print writer.
|
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