org.dishevelled.bio.assembly.gfa2

Class Set

java.lang.Object

org.dishevelled.bio.assembly.gfa.GfaRecord

org.dishevelled.bio.assembly.gfa2.Gfa2Record

org.dishevelled.bio.assembly.gfa2.Set

@Immutable
public final class Set
extends Gfa2Record

Set GFA 2.0 record.

Author:

Michael Heuer

Constructor Summary

Constructors

Constructor and Description
Set(String id, Set<String> ids, Map<String,Tag> tags) Create a new set GFA 2.0 record.

Method Summary

Modifier and Type	Method and Description
boolean	equals(Object o)
String	getId() Return the identifier for this set, if any.
Optional<String>	getIdOpt() Return an optional wrapping the identifier for this set.
Set<String>	getIds() Return an immutable unordered set of identifiers for this set.
int	hashCode()
boolean	hasId() Return true if this set has an identifier.
String	toString()
static Set	valueOf(String value) Parse a set GFA 2.0 record from the specified value.

Methods inherited from class org.dishevelled.bio.assembly.gfa.GfaRecord

containsTagKey, getTagByteArray, getTagByteArrayOpt, getTagBytes, getTagBytesOpt, getTagCharacter, getTagCharacterOpt, getTagFloat, getTagFloatOpt, getTagFloats, getTagFloatsOpt, getTagInteger, getTagIntegerOpt, getTagIntegers, getTagIntegersOpt, getTags, getTagString, getTagStringOpt

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

Set

public Set(@Nullable
           String id,
           Set<String> ids,
           Map<String,Tag> tags)

Create a new set GFA 2.0 record.

Parameters:

id - identifier, if any

ids - unordered set of identifiers, must not be null

tags - tags, must not be null

Method Detail

hasId

public boolean hasId()

Return true if this set has an identifier.

Returns:

true if this set has an identifier

Since:

1.3.2

getId

public String getId()

Return the identifier for this set, if any.

Returns:

the identifier for this set, if any

getIdOpt

public Optional<String> getIdOpt()

Return an optional wrapping the identifier for this set.

Returns:

an optional wrapping the identifier for this set

getIds

public Set<String> getIds()

Return an immutable unordered set of identifiers for this set.

Returns:

an immutable unordered set of identifiers for this set

hashCode

public int hashCode()

Overrides:

hashCode in class Object

equals

public boolean equals(Object o)

Overrides:

equals in class Object

toString

public String toString()

Overrides:

toString in class Object

valueOf

public static Set valueOf(String value)

Parse a set GFA 2.0 record from the specified value.

Parameters:

value - value, must not be null

Returns:

a set GFA 2.0 record parsed from the specified value