Hierarchy For All Packages

Package Hierarchies:

• org.dishevelled.bio.assembly,
• org.dishevelled.bio.assembly.gfa,
• org.dishevelled.bio.assembly.gfa1,
• org.dishevelled.bio.assembly.gfa2

Class Hierarchy

• java.lang.Object
  • org.dishevelled.bio.assembly.gfa2.Alignment
  • org.dishevelled.bio.assembly.gfa1.Gfa1Adapter (implements org.dishevelled.bio.assembly.gfa1.Gfa1Listener)
  • org.dishevelled.bio.assembly.gfa1.Gfa1Reader
  • org.dishevelled.bio.assembly.gfa1.Gfa1Writer
  • org.dishevelled.bio.assembly.gfa2.Gfa2Adapter (implements org.dishevelled.bio.assembly.gfa2.Gfa2Listener)
  • org.dishevelled.bio.assembly.gfa2.Gfa2Reader
  • org.dishevelled.bio.assembly.gfa2.Gfa2Writer
  • org.dishevelled.bio.assembly.gfa.GfaRecord
    • org.dishevelled.bio.assembly.gfa1.Gfa1Record
      • org.dishevelled.bio.assembly.gfa1.Containment
      • org.dishevelled.bio.assembly.gfa1.Header
      • org.dishevelled.bio.assembly.gfa1.Link
      • org.dishevelled.bio.assembly.gfa1.Path
      • org.dishevelled.bio.assembly.gfa1.Segment
      • org.dishevelled.bio.assembly.gfa1.Traversal
    • org.dishevelled.bio.assembly.gfa2.Gfa2Record
      • org.dishevelled.bio.assembly.gfa2.Edge
      • org.dishevelled.bio.assembly.gfa2.Fragment
      • org.dishevelled.bio.assembly.gfa2.Gap
      • org.dishevelled.bio.assembly.gfa2.Header
      • org.dishevelled.bio.assembly.gfa2.Path
      • org.dishevelled.bio.assembly.gfa2.Segment
      • org.dishevelled.bio.assembly.gfa2.Set
  • org.dishevelled.bio.assembly.gfa2.Position
  • org.dishevelled.bio.assembly.gfa.Reference
  • org.dishevelled.bio.assembly.gfa.Tag

Interface Hierarchy

• org.dishevelled.bio.assembly.gfa1.Gfa1Listener
• org.dishevelled.bio.assembly.gfa2.Gfa2Listener

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.dishevelled.bio.assembly.gfa.Orientation