org.dishevelled.bio.tools

Class FilterGfa1.MappingQualityFilter

java.lang.Object

org.dishevelled.bio.tools.FilterGfa1.MappingQualityFilter

All Implemented Interfaces:

FilterGfa1.Filter

Enclosing class:

FilterGfa1

public static final class FilterGfa1.MappingQualityFilter
extends Object
implements FilterGfa1.Filter

Mapping quality filter.

Constructor Summary

Constructors

Constructor and Description
MappingQualityFilter(int mappingQuality) Create a new mapping quality filter with the specified mapping quality.

Method Summary

Modifier and Type	Method and Description
boolean	accept(Gfa1Record record) Return true if the specified GFA 1.0 record should be accepted by this filter.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MappingQualityFilter

public MappingQualityFilter(int mappingQuality)

Create a new mapping quality filter with the specified mapping quality.

Parameters:

mappingQuality - mapping quality

Method Detail

accept

public boolean accept(Gfa1Record record)

Description copied from interface: FilterGfa1.Filter

Return true if the specified GFA 1.0 record should be accepted by this filter.

Specified by:

accept in interface FilterGfa1.Filter

Parameters:

record - GFA 1.0 record

Returns:

true if the specified GFA 1.0 record should be accepted by this filter