org.dishevelled.bio.tools

Class FilterPaf.MappingQualityFilter

java.lang.Object

org.dishevelled.bio.tools.FilterPaf.MappingQualityFilter

All Implemented Interfaces:

FilterPaf.Filter

Enclosing class:

FilterPaf

public static final class FilterPaf.MappingQualityFilter
extends Object
implements FilterPaf.Filter

Mapping quality filter.

Constructor Summary

Constructors

Constructor and Description
MappingQualityFilter(int mappingQuality) Create a new mapping quality score filter with the specified mapping quality.

Method Summary

Modifier and Type	Method and Description
boolean	accept(PafRecord record) Return true if the specified PAF record should be accepted by this filter.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MappingQualityFilter

public MappingQualityFilter(int mappingQuality)

Create a new mapping quality score filter with the specified mapping quality.

Parameters:

mappingQuality - mapping quality

Method Detail

accept

public boolean accept(PafRecord record)

Description copied from interface: FilterPaf.Filter

Return true if the specified PAF record should be accepted by this filter.

Specified by:

accept in interface FilterPaf.Filter

Parameters:

record - PAF record

Returns:

true if the specified PAF record should be accepted by this filter