org.dishevelled.bio.tools

Class FilterSam.ScriptFilter

java.lang.Object

org.dishevelled.bio.tools.FilterSam.ScriptFilter

All Implemented Interfaces:

FilterSam.Filter

Enclosing class:

FilterSam

public static final class FilterSam.ScriptFilter
extends Object
implements FilterSam.Filter

Script filter.

Constructor Summary

Constructors

Constructor and Description
ScriptFilter(String script) Create a new script filter with the specified script.

Method Summary

Modifier and Type	Method and Description
boolean	accept(SamRecord record) Return true if the specified SAM record should be accepted by this filter.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ScriptFilter

public ScriptFilter(String script)

Create a new script filter with the specified script.

Parameters:

script - script

Method Detail

accept

public boolean accept(SamRecord record)

Description copied from interface: FilterSam.Filter

Return true if the specified SAM record should be accepted by this filter.

Specified by:

accept in interface FilterSam.Filter

Parameters:

record - SAM record

Returns:

true if the specified SAM record should be accepted by this filter