| Modifier and Type | Class and Description |
|---|---|
static class |
FilterRgfa.FragmentCountFilter
Fragment count filter.
|
static class |
FilterRgfa.KmerCountFilter
K-mer count filter.
|
static class |
FilterRgfa.LengthFilter
Length filter.
|
static class |
FilterRgfa.MappingQualityFilter
Mapping quality filter.
|
static class |
FilterRgfa.MismatchCountFilter
Mismatch count filter.
|
static class |
FilterRgfa.ReadCountFilter
Read count filter.
|
static class |
FilterRgfa.ScriptFilter
Script filter.
|
static class |
FilterRgfa.SegmentFilter
Segment filter.
|
| Constructor and Description |
|---|
FilterRgfa(List<FilterRgfa.Filter> filters,
File inputRgfaFile,
File outputRgfaFile)
Filter assembly in rGFA format.
|
FilterRgfa(List<FilterRgfa.Filter> filters,
Path inputRgfaPath,
File outputRgfaFile)
Filter assembly in rGFA format.
|
Copyright (c) 2013-2023 held jointly by the individual authors. Licensed under the GNU Lesser General Public License (LGPL).