Package org.molgenis.data.csv

Class CsvRepository

java.lang.Object

org.molgenis.data.support.AbstractRepository

org.molgenis.data.csv.CsvRepository

All Implemented Interfaces:

Closeable, AutoCloseable, Iterable<Entity>, Repository<Entity>

public class CsvRepository
extends AbstractRepository

Repository implementation for csv files.

The filename without the extension is considered to be the entityname

Constructor Summary

Constructors

Constructor	Description
CsvRepository(File file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory, String sheetName, List<CellProcessor> cellProcessors)
CsvRepository(File file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory, List<CellProcessor> cellProcessors)
CsvRepository(File file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory, List<CellProcessor> cellProcessors, Character separator)

Method Summary

Modifier and Type	Method	Description
void	addCellProcessor(CellProcessor cellProcessor)
long	count()
Set<RepositoryCapability>	getCapabilities()
EntityType	getEntityType()
@NotNull Iterator<Entity>	iterator()

Methods inherited from class org.molgenis.data.support.AbstractRepository

add, add, aggregate, close, count, delete, delete, deleteAll, deleteAll, deleteById, findAll, findAll, findAll, findOne, findOneById, findOneById, forEachBatched, getName, getQueryOperators, query, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Methods inherited from interface org.molgenis.data.Repository

forEachBatched, getExistingIDs, upsertBatch

Constructor Detail

CsvRepository

public CsvRepository(File file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory,
                     @Nullable @CheckForNull
                     List<CellProcessor> cellProcessors,
                     Character separator)

CsvRepository

public CsvRepository(File file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory,
                     @Nullable @CheckForNull
                     List<CellProcessor> cellProcessors)

CsvRepository

public CsvRepository(File file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory,
                     String sheetName,
                     @Nullable @CheckForNull
                     List<CellProcessor> cellProcessors)

Method Detail

iterator

@NotNull
public @NotNull Iterator<Entity> iterator()

getEntityType

public EntityType getEntityType()

addCellProcessor

public void addCellProcessor(CellProcessor cellProcessor)

getCapabilities

public Set<RepositoryCapability> getCapabilities()

count

public long count()

Specified by:

count in interface Repository<Entity>

Overrides:

count in class AbstractRepository