Package org.molgenis.data.csv

Class CsvRepositoryCollection

java.lang.Object

org.molgenis.data.support.AbstractRepositoryCollection

org.molgenis.data.file.support.FileRepositoryCollection

org.molgenis.data.csv.CsvRepositoryCollection

All Implemented Interfaces:

Iterable<Repository<Entity>>, RepositoryCollection

public class CsvRepositoryCollection
extends FileRepositoryCollection

Reads csv and tsv files. Can be bundled together in a zipfile.

The exposes the files as Repository. The names of the repositories are the names of the files without the extension

Field Summary

Fields

Modifier and Type	Field	Description
static String	NAME

Fields inherited from class org.molgenis.data.file.support.FileRepositoryCollection

cellProcessors

Constructor Summary

Constructors

Constructor	Description
CsvRepositoryCollection(File file)
CsvRepositoryCollection(File file, CellProcessor... cellProcessors)

Method Summary

Modifier and Type	Method	Description
Iterable<String>	getEntityTypeIds()
String	getName()
Repository<Entity>	getRepository(String id)
boolean	hasRepository(String name)
boolean	hasRepository(EntityType entityType)
void	init()
Iterator<Repository<Entity>>	iterator()
void	setAttributeFactory(AttributeFactory attrMetaFactory)
void	setEntityTypeFactory(EntityTypeFactory entityTypeFactory)

Methods inherited from class org.molgenis.data.file.support.FileRepositoryCollection

getFileNameExtensions

Methods inherited from class org.molgenis.data.support.AbstractRepositoryCollection

addAttribute, createRepository, deleteAttribute, deleteRepository, getCapabilities, getRepository, updateAttribute, updateRepository

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Methods inherited from interface org.molgenis.data.RepositoryCollection

stream

Field Detail

NAME

public static final String NAME

See Also:

Constant Field Values

Constructor Detail

CsvRepositoryCollection

public CsvRepositoryCollection(File file)

CsvRepositoryCollection

public CsvRepositoryCollection(File file,
                               CellProcessor... cellProcessors)

Method Detail

init

public void init()

Specified by:

init in class FileRepositoryCollection

getEntityTypeIds

public Iterable<String> getEntityTypeIds()

getRepository

public Repository<Entity> getRepository(String id)

getName

public String getName()

iterator

public Iterator<Repository<Entity>> iterator()

hasRepository

public boolean hasRepository(String name)

hasRepository

public boolean hasRepository(EntityType entityType)

setEntityTypeFactory

@Autowired
public void setEntityTypeFactory(EntityTypeFactory entityTypeFactory)

setAttributeFactory

@Autowired
public void setAttributeFactory(AttributeFactory attrMetaFactory)