org.molgenis.omx.biobankconnect.wizard

Class BiobankConnectController

java.lang.Object

org.molgenis.framework.ui.MolgenisPluginController

org.molgenis.ui.wizard.AbstractWizardController

org.molgenis.omx.biobankconnect.wizard.BiobankConnectController

@Controller
@RequestMapping(value="/plugin/biobankconnect")
public class BiobankConnectController
extends AbstractWizardController

Field Summary

Fields

Modifier and Type	Field and Description
static String	ID
static String	URI

Fields inherited from class org.molgenis.framework.ui.MolgenisPluginController

PLUGIN_URI_PREFIX

Constructor Summary

Constructors

Constructor and Description
BiobankConnectController(ChooseCataloguePage chooseCataloguePager, OntologyAnnotatorPage ontologyAnnotatorPager, OntologyMatcherPage ontologyMatcherPager, MappingManagerPage mappingManagerPager, ProgressingBarPage progressingBarPager)

Method Summary

Methods

Modifier and Type	Method and Description
String	annotate(javax.servlet.http.HttpServletRequest request)
OntologyMatcherResponse	checkMatch()
protected Wizard	createWizard()
List<String>	getJavascripts()
List<String>	getStylesheets()
String	removeAnnotations(javax.servlet.http.HttpServletRequest request)
void	updateDocument(UpdateIndexRequest request)

Methods inherited from class org.molgenis.ui.wizard.AbstractWizardController

init, next, previous, restart, wizard

Methods inherited from class org.molgenis.framework.ui.MolgenisPluginController

getId, getUri

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ID

public static final String ID

See Also:

Constant Field Values

URI

public static final String URI

See Also:

Constant Field Values

Constructor Detail

BiobankConnectController

@Autowired
public BiobankConnectController(ChooseCataloguePage chooseCataloguePager,
                                  OntologyAnnotatorPage ontologyAnnotatorPager,
                                  OntologyMatcherPage ontologyMatcherPager,
                                  MappingManagerPage mappingManagerPager,
                                  ProgressingBarPage progressingBarPager)

Method Detail

createWizard

protected Wizard createWizard()

Specified by:

createWizard in class AbstractWizardController

annotate

@RequestMapping(value="/annotate",
                method=POST)
public String annotate(javax.servlet.http.HttpServletRequest request)
                throws Exception

Throws:

Exception

removeAnnotations

@RequestMapping(value="/annotate/remove",
                method=POST)
public String removeAnnotations(javax.servlet.http.HttpServletRequest request)
                         throws Exception

Throws:

Exception

updateDocument

@RequestMapping(method=POST,
                value="/annotate/update",
                consumes="application/json")
@ResponseStatus(value=NO_CONTENT)
public void updateDocument(@RequestBody
                                                UpdateIndexRequest request)

checkMatch

@RequestMapping(method=GET,
                value="/match/status",
                produces="application/json")
@ResponseBody
public OntologyMatcherResponse checkMatch()
                                   throws DatabaseException

Throws:

DatabaseException

getJavascripts

@ModelAttribute(value="javascripts")
public List<String> getJavascripts()

Overrides:

getJavascripts in class AbstractWizardController

getStylesheets

@ModelAttribute(value="stylesheets")
public List<String> getStylesheets()

Overrides:

getStylesheets in class AbstractWizardController