Uses of Interface
org.rcsb.strucmotif.align.AlignmentService

Packages that use AlignmentService

Package	Description
org.rcsb.strucmotif.align
org.rcsb.strucmotif.core

Uses of AlignmentService in org.rcsb.strucmotif.align

Classes in org.rcsb.strucmotif.align that implement AlignmentService

Modifier and Type	Class	Description
class	QuaternionAlignmentService	Align 2 sets of residues by a quaternion-based characteristic polynomial.

Uses of AlignmentService in org.rcsb.strucmotif.core

Constructors in org.rcsb.strucmotif.core with parameters of type AlignmentService

Modifier	Constructor	Description
	HitScorer(List<Map<LabelAtomId,float[]>> queryResidues, AtomPairingScheme atomPairingScheme, AlignmentService alignmentService)	Construct a query-specific hit scorer.
	MotifSearchRuntimeImpl(TargetAssembler targetAssembler, ThreadPool threadPool, MotifSearchConfig motifSearchConfig, AlignmentService alignmentService, StructureDataProvider structureDataProvider, StateRepository stateRepository)	Injectable constructor.