Package org.rcsb.strucmotif.core

Class TargetAssemblerImpl

java.lang.Object

org.rcsb.strucmotif.core.TargetAssemblerImpl

All Implemented Interfaces:

TargetAssembler

@Service
public class TargetAssemblerImpl
extends Object
implements TargetAssembler

The default strucmotif-search target assembler.

Constructor Summary

Constructors

Constructor	Description
TargetAssemblerImpl(InvertedIndex invertedIndex, ThreadPool threadPool)	Injectable constructor.

Method Summary

Modifier and Type	Method	Description
void	assemble(MotifSearchResult response)	Search: i.e.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

TargetAssemblerImpl

@Autowired
public TargetAssemblerImpl(InvertedIndex invertedIndex,
 ThreadPool threadPool)

Injectable constructor.

Parameters:

invertedIndex - inverted index

threadPool - thread pool

Method Details

assemble

public void assemble(MotifSearchResult response)
              throws ExecutionException,
InterruptedException

Description copied from interface: TargetAssembler

Search: i.e. find all paths through all target structures which reasonably resemble the structure of the query motif.

Specified by:

assemble in interface TargetAssembler

Parameters:

response - the container to work on

Throws:

ExecutionException - thrown by multi-threading impl

InterruptedException - thrown by multi-threading impl