Uses of Class
org.rcsb.strucmotif.domain.Transformation
Packages that use Transformation
Package
Description
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Uses of Transformation in org.rcsb.strucmotif.align
Methods in org.rcsb.strucmotif.align that return types with arguments of type Transformation -
Uses of Transformation in org.rcsb.strucmotif.domain
Fields in org.rcsb.strucmotif.domain declared as TransformationModifier and TypeFieldDescriptionstatic final TransformationTransformation.IDENTITY_TRANSFORMATIONMethods in org.rcsb.strucmotif.domain that return TransformationModifier and TypeMethodDescriptionstatic TransformationTransformation.of(float[][] transformation) -
Uses of Transformation in org.rcsb.strucmotif.domain.align
Methods in org.rcsb.strucmotif.domain.align that return TransformationModifier and TypeMethodDescriptionAlignmentResult.getTransformation()The transformation which recreates this alignment when applied to the 2nd argument.AlignmentResultImpl.getTransformation()Constructors in org.rcsb.strucmotif.domain.align with parameters of type TransformationModifierConstructorDescriptionAlignmentResultImpl(Transformation transformation, float rmsd) Construct an alignment result. -
Uses of Transformation in org.rcsb.strucmotif.domain.result
Methods in org.rcsb.strucmotif.domain.result that return TransformationModifier and TypeMethodDescriptionHit.getTransformation()Returns the transformation yielded by the underlying alignment.Constructors in org.rcsb.strucmotif.domain.result with parameters of type TransformationModifierConstructorDescriptionHit(String structureIdentifier, String assemblyIdentifier, List<LabelSelection> labelSelections, List<ResidueType> residueTypes, float rmsd, Transformation transformation) Construct a transformed hit (i.e., scored by an alignment). -
Uses of Transformation in org.rcsb.strucmotif.domain.structure
Methods in org.rcsb.strucmotif.domain.structure that return TransformationModifier and TypeMethodDescriptionStructure.getTransformation(String structOperIdentifier) Access to a specific transformation.Methods in org.rcsb.strucmotif.domain.structure that return types with arguments of type Transformation