Uses of Class
org.rcsb.strucmotif.domain.motif.ResiduePairDescriptor

Packages that use ResiduePairDescriptor

Package	Description
org.rcsb.strucmotif.domain.motif
org.rcsb.strucmotif.domain.query
org.rcsb.strucmotif.io

Uses of ResiduePairDescriptor in org.rcsb.strucmotif.domain.motif

Methods in org.rcsb.strucmotif.domain.motif that return ResiduePairDescriptor

Modifier and Type	Method	Description
ResiduePairDescriptor	ResiduePairOccurrence.getResiduePairDescriptor()	What are the properties of this pair?

Methods in org.rcsb.strucmotif.domain.motif that return types with arguments of type ResiduePairDescriptor

Modifier and Type	Method	Description
Stream<ResiduePairDescriptor>	ResiduePairOccurrence.residuePairDescriptorsByTolerance(int backboneTolerance, int sideChainTolerance, int angleTolerance, Map<IndexSelection,Set<ResidueType>> exchanges)	Traverse all ResiduePairDescriptor instances which are compatible to this one given the specified parameters and registered position-specific exchanges (if any).

Constructors in org.rcsb.strucmotif.domain.motif with parameters of type ResiduePairDescriptor

Modifier	Constructor	Description
	ResiduePairOccurrence(ResiduePairDescriptor residuePairDescriptor, ResiduePairIdentifier residuePairIdentifier)	Construct a pair occurrence.

Uses of ResiduePairDescriptor in org.rcsb.strucmotif.domain.query

Methods in org.rcsb.strucmotif.domain.query that return types with arguments of type ResiduePairDescriptor

Modifier and Type	Method	Description
List<ResiduePairDescriptor>	QueryStructure.getResiduePairDescriptors()	All word descriptors in this query structure.

Uses of ResiduePairDescriptor in org.rcsb.strucmotif.io

Methods in org.rcsb.strucmotif.io with parameters of type ResiduePairDescriptor

Modifier and Type	Method	Description
protected InputStream	InvertedIndexImpl.getInputStream(ResiduePairDescriptor residuePairDescriptor)	Acquire the input stream for a descriptor.
void	InvertedIndex.insert(ResiduePairDescriptor residuePairDescriptor, Map<String,Collection<ResiduePairIdentifier>> residuePairOccurrences)	Insert operation for new data.
void	InvertedIndexImpl.insert(ResiduePairDescriptor residuePairDescriptor, Map<String,Collection<ResiduePairIdentifier>> residuePairOccurrences)
Stream<Pair<String,InvertedIndexResiduePairIdentifier[]>>	InvertedIndex.select(ResiduePairDescriptor residuePairDescriptor)	Perform lookup for a particular bin.
Stream<Pair<String,InvertedIndexResiduePairIdentifier[]>>	InvertedIndexImpl.select(ResiduePairDescriptor residuePairDescriptor)