Package org.rcsb.strucmotif.domain.query

Class PositionSpecificExchange

java.lang.Object

org.rcsb.strucmotif.domain.query.PositionSpecificExchange

public class PositionSpecificExchange
extends Object

Defines a position-specific exchange for a particular position in the query structure.

Constructor Summary

Constructors

Constructor	Description
PositionSpecificExchange(LabelSelection labelSelection, Set<ResidueType> residueTypes)	Constructs a new position-specific exchange.
PositionSpecificExchange(LabelSelection labelSelection, ResidueType... residueTypes)

Method Summary

Modifier and Type	Method	Description
LabelSelection	getLabelSelection()	The position this exchange references.
Set<ResidueType>	getResidueTypes()	The set of allowed component types at that position.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PositionSpecificExchange

public PositionSpecificExchange(LabelSelection labelSelection,
 ResidueType... residueTypes)

Parameters:

labelSelection - selector of the referenced position

residueTypes - all allowed types (must include original type if still allowed)

See Also:

• (LabelSelection, Set)

PositionSpecificExchange

public PositionSpecificExchange(LabelSelection labelSelection,
 Set<ResidueType> residueTypes)

Constructs a new position-specific exchange.

Parameters:

labelSelection - selector of the referenced position

residueTypes - all allowed types (must include original type if still allowed)

Method Details

getLabelSelection

public LabelSelection getLabelSelection()

The position this exchange references.

Returns:

the LabelSelection of a residue

getResidueTypes

public Set<ResidueType> getResidueTypes()

The set of allowed component types at that position. Must explicitly include the original residue type if that should still be allowed.

Returns:

all types that can occur at this position