Package org.rcsb.strucmotif.domain.structure

Enum LabelAtomId

java.lang.Object

java.lang.Enum<LabelAtomId>

org.rcsb.strucmotif.domain.structure.LabelAtomId

All Implemented Interfaces:

Serializable, Comparable<LabelAtomId>, java.lang.constant.Constable

public enum LabelAtomId
extends Enum<LabelAtomId>

Enumerates all 'common' atoms by name.

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
C
C1_PRIME
C2
C2_PRIME
C3_PRIME
C4
C4_PRIME
C5
C5_PRIME
C6
C8
CA
CB
CD
CD1
CD2
CE
CE1
CE2
CE3
CG
CG1
CG2
CH2
CZ
CZ2
CZ3
N
N1
N2
N3
N4
N6
N7
N9
ND1
ND2
NE
NE1
NE2
NH1
NH2
NZ
O
O1P
O2
O2_PRIME
O2P
O3_PRIME
O4
O4_PRIME
O5_PRIME
O6
OD1
OD2
OE1
OE2
OG
OG1
OH
OP1
OP2
OP3
OXT
P
SD
SG
UNKNOWN_ATOM

Method Summary

Modifier and Type	Method	Description
String	getLabelAtomId()
static LabelAtomId	ofLabelAtomId(String labelAtomId)	Resolve a label_atom_id.
static LabelAtomId	valueOf(String name)	Returns the enum constant of this type with the specified name.
static LabelAtomId[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

C

public static final LabelAtomId C

C1_PRIME

public static final LabelAtomId C1_PRIME

C2

public static final LabelAtomId C2

C2_PRIME

public static final LabelAtomId C2_PRIME

C3_PRIME

public static final LabelAtomId C3_PRIME

C4

public static final LabelAtomId C4

C4_PRIME

public static final LabelAtomId C4_PRIME

C5

public static final LabelAtomId C5

C5_PRIME

public static final LabelAtomId C5_PRIME

C6

public static final LabelAtomId C6

C8

public static final LabelAtomId C8

CA

public static final LabelAtomId CA

CB

public static final LabelAtomId CB

CD

public static final LabelAtomId CD

CD1

public static final LabelAtomId CD1

CD2

public static final LabelAtomId CD2

CE

public static final LabelAtomId CE

CE1

public static final LabelAtomId CE1

CE2

public static final LabelAtomId CE2

CE3

public static final LabelAtomId CE3

CG

public static final LabelAtomId CG

CG1

public static final LabelAtomId CG1

CG2

public static final LabelAtomId CG2

CH2

public static final LabelAtomId CH2

CZ

public static final LabelAtomId CZ

CZ2

public static final LabelAtomId CZ2

CZ3

public static final LabelAtomId CZ3

N

public static final LabelAtomId N

N1

public static final LabelAtomId N1

N2

public static final LabelAtomId N2

N3

public static final LabelAtomId N3

N4

public static final LabelAtomId N4

N6

public static final LabelAtomId N6

N7

public static final LabelAtomId N7

N9

public static final LabelAtomId N9

ND1

public static final LabelAtomId ND1

ND2

public static final LabelAtomId ND2

NE

public static final LabelAtomId NE

NE1

public static final LabelAtomId NE1

NE2

public static final LabelAtomId NE2

NH1

public static final LabelAtomId NH1

NH2

public static final LabelAtomId NH2

NZ

public static final LabelAtomId NZ

O

public static final LabelAtomId O

O1P

public static final LabelAtomId O1P

O2

public static final LabelAtomId O2

O2_PRIME

public static final LabelAtomId O2_PRIME

O2P

public static final LabelAtomId O2P

O3_PRIME

public static final LabelAtomId O3_PRIME

O4

public static final LabelAtomId O4

O4_PRIME

public static final LabelAtomId O4_PRIME

O5_PRIME

public static final LabelAtomId O5_PRIME

O6

public static final LabelAtomId O6

OD1

public static final LabelAtomId OD1

OD2

public static final LabelAtomId OD2

OE1

public static final LabelAtomId OE1

OE2

public static final LabelAtomId OE2

OG

public static final LabelAtomId OG

OG1

public static final LabelAtomId OG1

OH

public static final LabelAtomId OH

OP1

public static final LabelAtomId OP1

OP2

public static final LabelAtomId OP2

OP3

public static final LabelAtomId OP3

OXT

public static final LabelAtomId OXT

P

public static final LabelAtomId P

SD

public static final LabelAtomId SD

SG

public static final LabelAtomId SG

UNKNOWN_ATOM

public static final LabelAtomId UNKNOWN_ATOM

Method Details

values

public static LabelAtomId[] values()

Returns an array containing the constants of this enum type, in the order they are declared.

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static LabelAtomId valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getLabelAtomId

public String getLabelAtomId()

ofLabelAtomId

public static LabelAtomId ofLabelAtomId(String labelAtomId)

Resolve a label_atom_id.

Parameters:

labelAtomId - the label atom id

Returns:

a LabelAtomId or null (if 'non-standard', e.g. occurring for 1 of the registered ResidueTypes)